Gene Caul_3338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3338 
Symbol 
ID5900793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3616932 
End bp3618137 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content67% 
IMG OID641563844 
Producthypothetical protein 
Protein accessionYP_001684963 
Protein GI167647300 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTGG CCTTGGCCAC ACTGTTGTAC GAGTGGCGTC GATACATGGC GGCCGTGGTC 
GCCCTGGCGT TTTCGGGTCT GCTGGTGCTG GCCCAGGTCG GTATCTTCGT CGGCATCGGC
AAGGGCTTCA CCGCCCAGAT CGACCGCGCC CGCGCCGACA TCATGGTGCT GGGTCCCGGC
GCCAAGGCGC TGTTCGGCGG CCCCTCGGGC CTGCCGCGCC GGATGATCCC GCTGGTCTAC
ACCCATCCAG AAGTGCTGCA GGTGGCCCCG CTCGACGGCT CGGGCGGTCG CTTCCAGAAT
ATCCTGTCGC CCGAGGAGCA GGCCAAGGCC GACGCCCGCG CCAAGCAGGC CGCAAAGGAC
GGCGGTCCGA AAGGCGGCGG CGGGGGTCGC AAGAGCGAAT TCGTCAACGT CACGGTGATC
GACGCGATCC CGGGCTTCGT CACCGTGCCG ACCGACTACA CGTTGAGCAT GGTCGAGGCC
CTGCGCCAGC CCTACGCCGT GGCCGTCGAC CAAACCGCCC TCAAGCGCCT GGGCGTCAAG
AAGGGCGACA AGGCCCTCTA CAACGGCAAG ACCATCACCA TCGGCGTCGT CACCCACGGC
TATCCGAACA TCATCCAGCC GACCCTGGTG ATGTCGCGAG ACACCCTGCG GATGCTGGGC
GAGGCCGACA CCGGCCAACG CGTCGGCCCG CTGATGGTGC AGATCCGCGA CCCGGCCCGC
GCCGAGATCG TCGCCGCCCA GCTGAACAAG AAGGGCGACG GCAAGTTCCG CGCCTGGACC
CGCCAGGAAC TGGCCGACGC CAATTCCGGA GCCATGCTCG ACGACCAGAT CATCGGCATC
ATCCTGGGCT TCTCGGCGTT CCTGGGCCTG CTGATCGGGG TGGTGATCAC CTGGCAGACC
CTGCGCGGGG CGATCATGGC CAACATCAAG GAATTCGCCA GCTTGCGCGC CCTGGGCGTG
TCGATCGGCG ACCTGCGCAA CATCGTCATG GAACTGAGCT TCTGGGTGGG GATCGTCGGG
GTGATCGCCT CGGGCGTGCT GACCTGGCTG GTCTCCCTGG CGGCCACGGC CGGCGGGGTG
CCGATGTCCT TCCCGCCCCT GCTGGTGGTG GTGGTCGCGG TGTTCCTGAT CATCATCGCC
ATGCTGTCCG GCTTCCTGTC GCTGGGCGTC CTGAAGAACA GCCAACCTGC GGACCTTCTG
CGATGA
 
Protein sequence
MSLALATLLY EWRRYMAAVV ALAFSGLLVL AQVGIFVGIG KGFTAQIDRA RADIMVLGPG 
AKALFGGPSG LPRRMIPLVY THPEVLQVAP LDGSGGRFQN ILSPEEQAKA DARAKQAAKD
GGPKGGGGGR KSEFVNVTVI DAIPGFVTVP TDYTLSMVEA LRQPYAVAVD QTALKRLGVK
KGDKALYNGK TITIGVVTHG YPNIIQPTLV MSRDTLRMLG EADTGQRVGP LMVQIRDPAR
AEIVAAQLNK KGDGKFRAWT RQELADANSG AMLDDQIIGI ILGFSAFLGL LIGVVITWQT
LRGAIMANIK EFASLRALGV SIGDLRNIVM ELSFWVGIVG VIASGVLTWL VSLAATAGGV
PMSFPPLLVV VVAVFLIIIA MLSGFLSLGV LKNSQPADLL R