| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_2557 |
|---|
| Symbol | aspS |
|---|
| ID | 5900012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 2778447 |
|---|
| End bp | 2780276 |
|---|
| Gene Length | 1830 bp |
|---|
| Protein Length | 609 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641563048 |
|---|
| Product | aspartyl-tRNA synthetase |
|---|
| Protein accession | YP_001684182 |
|---|
| Protein GI | 167646519 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0173] Aspartyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGCCT ACCGCACCCA CACCTGCGGC GCCCTGCGCG CCTCCGACAC CGGCGCGAGC
GTTCGCGTGT CGGGCTGGAT CCACCGCAAG CGCGACCACG GCGGGCTGGT CTTCATCGAC
CTGCGCGACC ATTACGGCCT GACCCAGCTG GTGCTGCACC CCGAAACCCC CGGGTTCGAC
GTGGTCGAGC GCCTGCGGGC CGAGAGCGTG ATCAAGATCG ACGGCGAGGT GGTGGCCCGC
GACGCCGCCG CCGTGAACCC CAACCTGCCC ACCGGCGAGA TCGAGATCCG CGTCTCGGCC
GTCGAGGTGC TGTCGGAAGC CGCCGAGCTG CCGCTGCCGG TGTTCGGCGA GCCGGACTAT
CCGGAAGAGA TCCGCCTCAA GCACCGCTAT CTCGACCTGC GCCGCGAGAC GCTGCACAAG
AACATCGTGC TGCGTTCGCG CGTGATCCAG TCGATCCGCT CGCGGATGTT CGCCCAGGGC
TTCAACGAGT TCCAGACCCC GATCCTGACG GCCTCGTCGC CGGAAGGCGC CCGCGACTTC
CTGGTGCCGT CGCGCCTGCA TCCGGGCAAG TTCTACGCGC TGCCCCAGGC GCCCCAGCAG
TTCAAGCAGC TGCTGATGGT CTCGGGCTTC GACCGTTATT TCCAGATCGC CCCGTGCTTC
CGCGACGAGG ATTTGCGCGC CGACCGGTCG CTGGAATTCT ACCAGCTCGA CGTCGAGATG
AGCTTCGTGA CGCAAGAAGA CGTGTTCGCG GCCATCGAGC CGGTGATGCA CGGCGTGTTC
GAGGAGTTCT CGGCCGGCAA GCCGGTGTCG CCGATCGACG GCGTCCATAC CTTCACCAAC
GATTTCGGCG CGACGCTGGA GCACCGGGGC TTCGAGCGCC TGACCTACGC CCAGTCGATG
GCCTGGTACG GCAGCGACAA GCCCGACCTG CGCAACCCGA TCAAGATGCA GGACGTCTCC
GAGCACTTCC GCGACGGCGG CTTTGGCCTG TTCGCCAAGA TCCTCGGCGC CGATCCGAAG
AACCGCGTGT GGGCGATTCC CGCCCCGACC GGTGGTTCGC GGGCCTTCTG CGACCGCATG
AACAGCTGGG CGCAGGGCGA AGGCCAGCCG GGCCTGGGCT ATGCGTTCTT CAGCAAGGAC
CAGAACGGCT GGGGCGGCCC GATCGCCAAG AACCTGGGCG AAGGCTTCCA GCCGATCGCC
GACCAGCTGG GCCTGACCCA TGACGACGCG GTGTTCTTCG TGGCCGGCGA CCCGGCCGTG
TTCGCCAAGT TCGCAGGGTT GGCCCGCACC CGGGTCGGGA CCGAGCTGAA GCTGGTTGAC
GAGGAGCAGT TCAAGTTCTG CTGGATCGTC GATTTCCCGA TGTTCGAATG GAACGAGGAC
GAGAAGAAGG TCGACTTCTC GCACAACCCG TTCTCGATGC CGCAAGGCGG GCTGGAGGCC
CTGGAGACCC AGGATCCGCT GACCATCCGC GCCTACCAGT ACGACATCGT CTGCAACGGC
TACGAGCTGT GCTCGGGGGC GATCCGCAAT CACAAGCCGG AGATCATGCT CAAGGCCTTC
GAGGTGGCCG GCTATGGTGC CGAGGTGGTG GAAGAGCAGT TCGGCGGCAT GCTGAACGCC
TTCCGCTATG GCGCCCCGCC CCACGGCGGC CTGGCCCCCG GCATCGACCG GATCGTCATG
CTGCTGGCCG AGCAGGTCGC CATCCGCGAG GTCATCGCCT TCCCGCTGAA CCAGCAGGGC
CAGGACCTGC TGATGAACGC CCCGGCCGAG GCCCAGGACC GCCAGTACAA GGAACTGTAC
ATCCGCTCCG CCCCGCCGAT CAAGGTCTAG
|
|---|
| Protein sequence | MHAYRTHTCG ALRASDTGAS VRVSGWIHRK RDHGGLVFID LRDHYGLTQL VLHPETPGFD
VVERLRAESV IKIDGEVVAR DAAAVNPNLP TGEIEIRVSA VEVLSEAAEL PLPVFGEPDY
PEEIRLKHRY LDLRRETLHK NIVLRSRVIQ SIRSRMFAQG FNEFQTPILT ASSPEGARDF
LVPSRLHPGK FYALPQAPQQ FKQLLMVSGF DRYFQIAPCF RDEDLRADRS LEFYQLDVEM
SFVTQEDVFA AIEPVMHGVF EEFSAGKPVS PIDGVHTFTN DFGATLEHRG FERLTYAQSM
AWYGSDKPDL RNPIKMQDVS EHFRDGGFGL FAKILGADPK NRVWAIPAPT GGSRAFCDRM
NSWAQGEGQP GLGYAFFSKD QNGWGGPIAK NLGEGFQPIA DQLGLTHDDA VFFVAGDPAV
FAKFAGLART RVGTELKLVD EEQFKFCWIV DFPMFEWNED EKKVDFSHNP FSMPQGGLEA
LETQDPLTIR AYQYDIVCNG YELCSGAIRN HKPEIMLKAF EVAGYGAEVV EEQFGGMLNA
FRYGAPPHGG LAPGIDRIVM LLAEQVAIRE VIAFPLNQQG QDLLMNAPAE AQDRQYKELY
IRSAPPIKV
|
|---|
| |