| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5388 |
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| Symbol | |
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| ID | 5873203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 6015662 |
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| End bp | 6016654 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641550524 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001671605 |
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| Protein GI | 167036374 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.74038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0344366 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCACA GTCACCTGAC CACCCTCAAT GCGGTTTCGC TGATCCTCAA TGTCTTTCAG
GCAGACGGTT GCGAGGCCTC GGCACTGCTG GCCGGCAGCG GCATCGGCCC GGCAGACCTG
GGCCACGCCG ATGCGCGCAT CACCACCCAG CAGGAACTGC AGGTGTGCGC CAACGCAGTG
GCCCGGCGTG AGGACATCGG CCTGGAGCTG GGCCGGCGCA TGCATGTGTC GTGCTACGGC
ATGCTCGGTT ACGCCCTGCT CTCCAGTGCC ACTTTGGGTG ACGCCTTGCG CCTGGCGCTG
CAGTATCCGG CACTGCTGGG AACAGTCTTC AAGCTGCGTT TGCTCGACGA CGGCCAGCGC
GTCTGGTTCA GCGCCAGCGA CTATCACGAC AGCCCTGCGC TGAGCGCGTT CAACGCAGAG
TTCTGCCTGG TTTCGCTGAA AGTCATCTGC GACGACCTGC TTGGCCGCCC GTTGCCGCTG
CTGGGCACCC GTTTCGAGCA CCCTCGTCCT GGTTACCACA CACGCTATGC CGATGCGTTC
CAATGCCCGA TCGGCTTCTC CGCCGAGGAC AATGCCTTTG CCTTCGAAAG GCGCTGGCTG
GATATGCCGC TGCCGCTGGC CGACCCGATT ACCCACAAGG CCATGAGTGA ACGCTGCCGA
CGCCTGAACC TGGAGTTCAC GGGCCGCCAG GCCTGGCTAG GGCGGATTCG CCAGCTGCTG
GTGCAGCAGT TGGACGCAGC ACCGGGGCTG GAAGGGCTGG CGAGGCAGAT GAACTGCTCG
TCGCGCACCC TGCGTCGGCA TTTACAGGCG TTGGGCTGCA GTTATCAACA GCTGCTGGAC
GAGCTAAGGT TCGAACGGGC CAAGCAGTTG TTGGCAGACG AGCAAATGCC GATTTACCGG
ATTGCCGAGA CCTTGGGCTT CAGTGAGACG GCCAGCTTTC GGCATGCGTT CCAACGCTGG
AGTGGTGTGG CGCCCAGCCA CTTTCGCGGT TGA
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| Protein sequence | MLHSHLTTLN AVSLILNVFQ ADGCEASALL AGSGIGPADL GHADARITTQ QELQVCANAV
ARREDIGLEL GRRMHVSCYG MLGYALLSSA TLGDALRLAL QYPALLGTVF KLRLLDDGQR
VWFSASDYHD SPALSAFNAE FCLVSLKVIC DDLLGRPLPL LGTRFEHPRP GYHTRYADAF
QCPIGFSAED NAFAFERRWL DMPLPLADPI THKAMSERCR RLNLEFTGRQ AWLGRIRQLL
VQQLDAAPGL EGLARQMNCS SRTLRRHLQA LGCSYQQLLD ELRFERAKQL LADEQMPIYR
IAETLGFSET ASFRHAFQRW SGVAPSHFRG
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