Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5154 |
Symbol | thiG |
ID | 5872969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5766469 |
End bp | 5767281 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641550292 |
Product | thiazole synthase |
Protein accession | YP_001671374 |
Protein GI | 167036143 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2022] Uncharacterized enzyme of thiazole biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.173906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.65179 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACG TTCGTAGCGA CAAGCCCTTC ACCCTGGCTG GGCGTACTTT CCAGTCGCGC CTGCTGGTCG GTACCGGCAA GTACCGTGAC ATGGAAGAAA CCCGCCTGGC CACCGAGGCC TCGGGTGCCG AAATCGTCAC CGTCGCCGTG CGCCGTACCA ACTTGGGCCA GAATGCGGGC GAGCCGAACC TGCTCGATGT ACTGTCGCCT GACAAGTACA CCATCCTGCC GAATACTGCA GGCTGCTTTG ACGCGGTGGA AGCGGTGCGT ACTTGTCGCC TGGCCCGCGA ACTGCTGGAT GGGCGCAAAT CGCATGAATC CCGGACGCTG GTAAAGCTGG AAGTGCTGGC CGACCAGAAA ACCCTGTTCC CCAACGTGAT CGAAACCCTC AAGGCCGCCG AAGTGTTGGT CAAGGAAGGT TTCGACGTGA TGGTGTACAC CAGCGACGAC CCGATCATCG CCCGTCAATT GGCCGAGGTG GGCTGCATCG CGGTCATGCC GTTGGCTGGC CTGATTGGTA CCGGCCTGGG CATCTGCAAC CCCTACAACC TGCAGATCAT CCTGGAAGAG TCCAAGGTGC CGGTGCTGGT CGACGCCGGT GTGGGTACAG CTTCCGACGC TACCATCGCC ATGGAAATGG GCTGCGAGGC GGTGCTGATG AATTCGGCCA TTGCCCACGC CCAGCAACCG GTGCTGATGG CCGAAGCCAT GAAGCACGCC ATCGTCGCCG GTCGCATGGC CTACCTGGCC GGCCGTATGC CGAAGAAACT CTATGCCAGC GCCTCTTCGC CGCTGGATGG TCTGATCAAG TAA
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Protein sequence | MSNVRSDKPF TLAGRTFQSR LLVGTGKYRD MEETRLATEA SGAEIVTVAV RRTNLGQNAG EPNLLDVLSP DKYTILPNTA GCFDAVEAVR TCRLARELLD GRKSHESRTL VKLEVLADQK TLFPNVIETL KAAEVLVKEG FDVMVYTSDD PIIARQLAEV GCIAVMPLAG LIGTGLGICN PYNLQIILEE SKVPVLVDAG VGTASDATIA MEMGCEAVLM NSAIAHAQQP VLMAEAMKHA IVAGRMAYLA GRMPKKLYAS ASSPLDGLIK
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