Gene PputGB1_4801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4801 
Symbol 
ID5872615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5369466 
End bp5370287 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content55% 
IMG OID641549939 
Producthypothetical protein 
Protein accessionYP_001671023 
Protein GI167035792 
COG category[S] Function unknown 
COG ID[COG4735] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.472026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTGG CCGACATTAC TTCGACAAGC GACCTCGAAA AGCTTCTGGC CGTCTCCGAG 
GTGGACGACA TCATCGCGTT GGTGAACTAC CTTACCGACA ACGGTGCGGG TCGCCTAGCC
CTTGATGGCG ATAATTGCAA ACGGCTTGTC GCCGCTCGCA ATGCGCGTCG TTTTTCAGTT
GGGGACTACG AATTGATCGC CAAAGAGATC CGCTTGTTTG GCGGAAATTC CATTTTGAAT
CTGTTCCGAA AGGACGGTGT GCCGTATCAG GAAATCGTCG AAGATGTAGC GAAGCATTTA
AAGGTAAATT TCGGCAAAGA TCCCATCAAT GTTATCGAGC AGGAGATTCT CGGAAAGATC
CTATCCCGTG CGTTCGACCA GATGTCCGAA GAAGAACGTC AGGTCATCCT GGAGGAGCTG
GGCGTCGCCA GCTACTCCAC CGCAGGGCCT GCTGCCGCCA TCGCCGCTAT TTGCGCGGCG
AAGGCGGGTG GGTTCGCCAC GTACAAACTC GCGGCAATCG TTGCCAACGC TATCGCTAAA
GCGATTTTGG GAAAGGGGCT TACATTTGCA GCCAGCGGTC AAATGATGCG CACCATCAGC
GTTGCCATCG GCCCGATCGG CTGGGCTATT ACAGCGCTTT GGACGGCTGC TGACTTGGCC
AGCCCCGCCT ATCGCGTCAC GGTTCCTTGT GTCGTTCAGT TGGCGTACAT GCGCCAAAAG
GCAATTATGG CCCTAGCTGC TAAGACCTGT GGCAATTGCA AAGCCAGCAT CGTGCGCTCG
TCGCGGTTCT GTTCTGAGTG CGGTACGCCC GCCGCAGTAT AA
 
Protein sequence
MNLADITSTS DLEKLLAVSE VDDIIALVNY LTDNGAGRLA LDGDNCKRLV AARNARRFSV 
GDYELIAKEI RLFGGNSILN LFRKDGVPYQ EIVEDVAKHL KVNFGKDPIN VIEQEILGKI
LSRAFDQMSE EERQVILEEL GVASYSTAGP AAAIAAICAA KAGGFATYKL AAIVANAIAK
AILGKGLTFA ASGQMMRTIS VAIGPIGWAI TALWTAADLA SPAYRVTVPC VVQLAYMRQK
AIMALAAKTC GNCKASIVRS SRFCSECGTP AAV