Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4801 |
Symbol | |
ID | 5872615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5369466 |
End bp | 5370287 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641549939 |
Product | hypothetical protein |
Protein accession | YP_001671023 |
Protein GI | 167035792 |
COG category | [S] Function unknown |
COG ID | [COG4735] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.472026 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTGG CCGACATTAC TTCGACAAGC GACCTCGAAA AGCTTCTGGC CGTCTCCGAG GTGGACGACA TCATCGCGTT GGTGAACTAC CTTACCGACA ACGGTGCGGG TCGCCTAGCC CTTGATGGCG ATAATTGCAA ACGGCTTGTC GCCGCTCGCA ATGCGCGTCG TTTTTCAGTT GGGGACTACG AATTGATCGC CAAAGAGATC CGCTTGTTTG GCGGAAATTC CATTTTGAAT CTGTTCCGAA AGGACGGTGT GCCGTATCAG GAAATCGTCG AAGATGTAGC GAAGCATTTA AAGGTAAATT TCGGCAAAGA TCCCATCAAT GTTATCGAGC AGGAGATTCT CGGAAAGATC CTATCCCGTG CGTTCGACCA GATGTCCGAA GAAGAACGTC AGGTCATCCT GGAGGAGCTG GGCGTCGCCA GCTACTCCAC CGCAGGGCCT GCTGCCGCCA TCGCCGCTAT TTGCGCGGCG AAGGCGGGTG GGTTCGCCAC GTACAAACTC GCGGCAATCG TTGCCAACGC TATCGCTAAA GCGATTTTGG GAAAGGGGCT TACATTTGCA GCCAGCGGTC AAATGATGCG CACCATCAGC GTTGCCATCG GCCCGATCGG CTGGGCTATT ACAGCGCTTT GGACGGCTGC TGACTTGGCC AGCCCCGCCT ATCGCGTCAC GGTTCCTTGT GTCGTTCAGT TGGCGTACAT GCGCCAAAAG GCAATTATGG CCCTAGCTGC TAAGACCTGT GGCAATTGCA AAGCCAGCAT CGTGCGCTCG TCGCGGTTCT GTTCTGAGTG CGGTACGCCC GCCGCAGTAT AA
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Protein sequence | MNLADITSTS DLEKLLAVSE VDDIIALVNY LTDNGAGRLA LDGDNCKRLV AARNARRFSV GDYELIAKEI RLFGGNSILN LFRKDGVPYQ EIVEDVAKHL KVNFGKDPIN VIEQEILGKI LSRAFDQMSE EERQVILEEL GVASYSTAGP AAAIAAICAA KAGGFATYKL AAIVANAIAK AILGKGLTFA ASGQMMRTIS VAIGPIGWAI TALWTAADLA SPAYRVTVPC VVQLAYMRQK AIMALAAKTC GNCKASIVRS SRFCSECGTP AAV
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