| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4710 |
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| Symbol | truB |
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| ID | 5872521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5263247 |
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| End bp | 5264164 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641549846 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001670932 |
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| Protein GI | 167035701 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.201435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCCAGG TCAAACGTAT CCGCCGCAAT GTCAGCGGCA TCATCCTGCT CGACAAGCCG
CTGGGCTTCA CGTCCAACGC CGCCCTGCAA AAGGTGCGCT GGCTGCTCAA TGCGGAAAAG
GCCGGCCACA CCGGTAGCCT CGATCCGTTG GCAACCGGCG TGCTGCCGCT GTGCTTCGGC
GAGGCGACCA AGTTTTCGCA GTACTTGCTC GATTCCGACA AGGGCTACGA AACCGTCATG
CAGATGGGGC AGACTACCAA CACCGGCGAT GCCGAGGGCG AGGTACTGCA GACCCGCGAC
GTGACCGTTG GTCGCGCCGA TATCGAGGCG CTGCTGCCAC GTTTTCGTGG CCCCATCAGC
CAGATACCGC CCATGTACTC GGCGCTCAAG CGTGATGGCC AGCCGCTGTA CAAACTGGCG
CGTGCAGGAG AGGTAGTGGA GCGCGAGGCG CGTTCTGTTA CTATTAACCG CTTGGAGTTG
CTCGAGTGCG AAGGCACCCG TGCACGGTTG AGCGTAGGAT GCAGCAAAGG CACCTATATC
CGCACCCTGG TGGAGGATAT CGGTGAAGCC CTAGGCTGCG GCGCTTATGT CGCCGAGCTG
CGCAGGACCC AGGCCGGGCC CTTCGCGCTG GCACAGACGG TTACCCTCGA GGAACTCGAA
CAGGCCCATG CCGACGGTGG CAACGAAGCG CTCGACCGCT TCCTGATGCC ATCTGACAGC
GGGCTGCAGG ACTGGCCGAT GGTCAGCCTG TCGGAACACA GTGCGTTCTA CTGGCTGCAT
GGGCAGGCGG TACGCGCGCC GGACGCGCCA CAATTTGGCA TGGTCCGGGT ACAGGATCAT
AATGCGCGCT TCATCGGTAT CGGTGAAGTG AGCGAAGACG GGCGCATTGC GCCGCGTCGG
CTGATTCGGT CGGAATGA
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| Protein sequence | MAQVKRIRRN VSGIILLDKP LGFTSNAALQ KVRWLLNAEK AGHTGSLDPL ATGVLPLCFG
EATKFSQYLL DSDKGYETVM QMGQTTNTGD AEGEVLQTRD VTVGRADIEA LLPRFRGPIS
QIPPMYSALK RDGQPLYKLA RAGEVVEREA RSVTINRLEL LECEGTRARL SVGCSKGTYI
RTLVEDIGEA LGCGAYVAEL RRTQAGPFAL AQTVTLEELE QAHADGGNEA LDRFLMPSDS
GLQDWPMVSL SEHSAFYWLH GQAVRAPDAP QFGMVRVQDH NARFIGIGEV SEDGRIAPRR
LIRSE
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