| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4587 |
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| Symbol | |
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| ID | 5872395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5128369 |
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| End bp | 5129244 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641549720 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001670809 |
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| Protein GI | 167035578 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.213128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCAC TCACCCAGTT GCAAGTGTTC AACGCCATGC ATGCCTCGCC CCACGCCCGG
CTGGAGCTGA GCGCGCACCT GGGCGACGGG CTGGCGGCGG CGTTGTGGAG CAACCGTGAC
GATGCTCGTG ATTACCAGGC ACCGACCCAT CACACCCTGT CGTGCTACAT CGCCGACGGC
ACCGGCACCT TCCGCCGCCA ACGCCCGGCC GACAAGGGCG CACCCGGCAA GCTGTGCGTG
ATGCCGGCCG GGCAGGAATC GAACTGGGTG GTCAATGGCG CGATCCGGCT GGCACACCTG
TATGTCAGCG AGGCGCAGTT CGCCCTGGGC TGCGTGCGCC TGCTCGACCG TGAGCCACGG
GAGCTGCAAC TGCAGGAGGC GACCTTTCTG GACGATCCAC AGCAGGCGGC ACGCTTTCGC
CAACTGATCC AGCTGGACTG GGACGAGCCC GGCGAACGCC TGCTGGCCAG CAGCCTGGCA
CACGAAATCG TCGACCATGC GCTGCTCAAC CAGGTCGGGC TGCGCCAAGG CCTGCGCCTG
AAAGGTGGGC TGGCGCCGAA CCTGCGCCGG CAGTTGGTCG AGTACATCGA AGCGCACCTG
GACCAGCCGA TTACCCTGGG TGAACTGGCC TTGCGCTGCA ACTTGTCCGA ATACCACTTC
GCACGCATGT TCCGCGCCAG TTTCGGGTTA CCGCCGCACC AGTACTTGCT GGCCAGGCGG
CTGCAGCGGG CTTGCGAGTT GTTGCGACTG GGGGAAATGC CGCTGGGCGA AATTGCCCTG
TTGTGCGGGT TTGCCAGTGC CAGCCATTTC AGTAACCGCT TCCGGCAGGC CCTTGGCGCA
ACGCCTGGGG AATATCGCTC GGCCATTCGC GGCTAA
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| Protein sequence | MTPLTQLQVF NAMHASPHAR LELSAHLGDG LAAALWSNRD DARDYQAPTH HTLSCYIADG
TGTFRRQRPA DKGAPGKLCV MPAGQESNWV VNGAIRLAHL YVSEAQFALG CVRLLDREPR
ELQLQEATFL DDPQQAARFR QLIQLDWDEP GERLLASSLA HEIVDHALLN QVGLRQGLRL
KGGLAPNLRR QLVEYIEAHL DQPITLGELA LRCNLSEYHF ARMFRASFGL PPHQYLLARR
LQRACELLRL GEMPLGEIAL LCGFASASHF SNRFRQALGA TPGEYRSAIR G
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