| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3860 |
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| Symbol | |
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| ID | 5871654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4305363 |
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| End bp | 4305974 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641548982 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001670086 |
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| Protein GI | 167034855 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.526451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.667209 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCACCA TTCGCGAGCG CAACAAGGAA CTGATCCTGC GCGCAGCCAG TGAAGAATTT
GCCGACAAGG GCTTCGCCGC CACCAAGACC AGCGATATCG CGGCCAAGGC CGGCCTGCCC
AAGCCGAACG TGTATTACTA CTTCAAGTCC AAGGACAACC TCTACCGCGA GGTCCTGGAA
AGCATCATCG CGCCGATCAT GCAGGCCTCC ACACCGTTCA ATGCCGACGG TGACCCGAAA
GAAGTGCTGA GCGCCTATAT TCGTTCGAAG ATCCGCATTT CGCGCGACCT GCCGTACGCC
TCCAAGGTGT TCGCCAGCGA GATCATGCAT GGCGCCCCAC ACCTGTCGCC GAACCAGGTG
GAGCAGTTGA ACGAGCAGGC CCGGCATAAC ATCGAGTGCA TCCAGCGCTG GATCGACCGT
GGGCAGATCG CCCATGTGGA CGCGCATCAC CTGATGTTCA GTATCTGGGC GGCGACCCAG
ACCTATGCCG ACTTCGACTG GCAGATTTCT GCAGTGACCG GCAAGGCCAA GCTGGCGGAC
AGTGATTACG ACGCGGCGGC CGAGACCATT ATCCGCATGG TATTGAAAGG CTGCGAGCCG
GAAGCAGCCT GA
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| Protein sequence | MSTIRERNKE LILRAASEEF ADKGFAATKT SDIAAKAGLP KPNVYYYFKS KDNLYREVLE
SIIAPIMQAS TPFNADGDPK EVLSAYIRSK IRISRDLPYA SKVFASEIMH GAPHLSPNQV
EQLNEQARHN IECIQRWIDR GQIAHVDAHH LMFSIWAATQ TYADFDWQIS AVTGKAKLAD
SDYDAAAETI IRMVLKGCEP EAA
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