| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3392 |
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| Symbol | |
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| ID | 5871177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3823841 |
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| End bp | 3831043 |
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| Gene Length | 7203 bp |
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| Protein Length | 2400 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641548507 |
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| Product | hypothetical protein |
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| Protein accession | YP_001669619 |
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| Protein GI | 167034388 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4733] Phage-related protein, tail component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0000447967 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTGGTG GCGTAAAGAA GATCGCTCAG GTAGCGGTCG GCGCGGTGAT TGGCTTTGTC
CAGGGCGGCC CTGTGGGTGC GGCTATCGGT GCCGGCATGG CCTTCTACAT GGCCGAGCAG
CAGGAGAAGC TGAACACCAA GTCGCCCCTG CGCGACAACG AGCCATCGGC TCAGACCGTC
CGCTCGTCCA AGGCGCCGGC ACGCTTCATC CTGGGCCGTG TGAGCACCGG TGGTGTGCTG
GTGTGGGCAC AGGAGCAGGC CGGTAACCAA ACGGACGGTG AGTGGCTGCA CCTGGTCTAT
GTACTGTGCG AGGGCGCCGT CGATGGCTTG GAGACTATTT ACCTGGGTGA GGAGGATATC
GCCACTTTCG GTGAGTTTGC TTCCTATGAA CTGATCGTCA ACCCCACGCA GGTGAACGCC
TTTCTTAATG CCAACTGCCC GGACTGGAAG GGCGAGCAGA TTGGCCGCGG GCTTTCCTTC
GTGCGCCTGT CGCTCAAGTA CAGTGCAGAG AAATTCCCTT CGGGTATCCC GGATGCGCGG
TTCGTGGTGC GCGGTCGCAA CGATATCTAT GACCCGCGCA CCGGCATGGC CGTTTACACC
GAGAACACCG CACTGCATAT CCTGTGGTTC CTGCGTAACC GCTGCGGCGT TCCGGATGAC
GAAATCGTGT TTGAGACCTT CGCCAGCGGC GCGAACGTCT GCGATGAGTC GGTAGCCAAC
CCGGACGGTA CAACCAGCCC GCGCTACCGC AGCAGTTGTG TGATTGGCGC GGACGAGCAG
CGCACCAACG TCCTGCAGAA ACTCGAAACT GCGTGTGGCG GTAGGACAAT CCGTGTGGGT
GGCCGTTGGA TGTTTCAGGC AGGGGCCTAC TACGGCCCGT ACGACTTCGA GATCACCGAG
GACATGGTGG TCGGCACCAT CACTGGCAGT ACCGAGCCGA CCAATGACGC AGCCATCAAC
ACGGTTCGCG GGACGTTCAT CGACACCTCG CAGTCGTGGA CCGAGACCGA CTATCCCGAG
GTGAGTGTTG CTGAGTGGGT GATCGAAGAT GGGGGGGAGG CAGCTGAAAC ACTGACCTTC
TCCTACGTCA CCGACGCCTA CCAGGCCCAG CGCCTAGCAA ACATTGAGCT GCGCCGCCGG
CGTGCGGGCG GCACCATCAA CGTGCCGCTG AATTTCCTTG GATACAACTG CCGGCCGGGC
CGCGCTGTTC GCGTGAACCT GCCGTCGCTG AACATCCTGG GAGAGTTCAT CGTCACCAAC
TGGAACATGG GCACCAATGA AGGCTGCTCT GCGTCGCTCC AGCAGTACGA CGCAGCGCAG
TTCGACGATG CAGTGGGCCA GCCGTACAAT CCAATCGGCT TCATCAAACT GCCAACTGGC
GGTCTCGGTA GCCCAACCGG GCTCACGTGG TCGACCGATG ACAACGCCGA GTCGGTACAG
GGCACTCTGT CGTGGGCGGC GCCCTCTGGC GTGGTCACCA GTTACGCCGT CACTGTTCGT
CAAGGCGCGA CCGCAGTCCA GGCTCAGCAG GTACCGGCCA CGGCGCTCAA GTTGCCCCTG
TCGGGCCTAC CGTCTGGTAG CTACACCATG AGCGTGGCCG CTCTCGGGCC GCTGACTCGC
TCCGGCGAGG CCAGCATTGC GGTGAGCATC GACGGTCCGC CGATCCCTGA GTCGTGCGTG
GTTCAGTCGA CCATCGACAC CATCACGCTG ATCCCGGGCA ACGCGCTGCA TGGTCTGAAT
GGGGGCACCT ATGAGTACTT CTTCTCGACC AACCCGCAGG CAACACAGGG TGACTACCTG
GGCCAAGGCC TGTCCCTGAC CCACACTGGG CTGGCATTTG CCACCAACTA CGCCTACTTC
GTCCGCTCGA AGAACGCCTA CGGAGTGAGT GCCTTCCTGA AGGTGGTAGC GTCCACCTCG
ACTGACATGG AGAACATGCT CGGTGCCTTG AAGGACAAGA TCGAAAGCGG ACAGCTGGCC
CCGGTGCTGC GCCAGGAAAT CGCCTTGATT TCCGGCCCGC CTACCCAGGC CGGCTCGGTC
GCCCAGCGGA TCGCAGCAGA AGCGACAGCG CGTGGCCAAG CCATTGCGGC CGAGGCCACA
GCCCGGGGTC AGGCCATCGC CGCTGAAACC ACCGCTCGCA ACCAGGCCAT TGCCACGGAG
GTGGTGGACC GCAACAAGGC GATCGCTGTC GAAACCCAGG CACGGACCAA GGCAATCAGC
GACGAATCTG CCGCCCGCGC CCAGGGCTTG CTGTCGGAAG CCCAGGCGCG CGGCGCGGCG
ATCACTAGCG AGGCGCAGGC CCGCCAGTCC GCAGACGACT CGCTGAGCCA GAAGATCGAC
ACCGTCACGG CGTCGGCCGG CAGCAACGCC GCGGCGATCC AGGCAGAGGC CACCGCCCGG
GCCAATGCCG ATTCGGCGCT GGGACAAAAG ATCGACACTG TGGCGGCCGG CACCGCCTCG
AACGCTGCGG CGATCAGCAA CGAGACCACG GCGCGGACCA CCGCCGACGC GGCTATGGCC
TCGCAGATCG CGAGCCTGCG CGCCGAGTCT GGCGGGTTTG ACTCGACGCT GAACTACGGC
TTTGCCTCGA CCGTTGAGGG CTGGGCAGGC ACGCGCTGCA CGCTGACCGT CGAGAACGGC
CGATTGGTCG TAACCAACGA CGCCGCTGGG GCCTACCTGA GCGCACCGTT GGTAGCGATC
AAGGGCCGCG ACCATGACCG CATCCGCTGC CGTATCACCC GCCGGGCGGG TAGCGGCTGG
ACCGGCCAGG TGACCTACAC CACTGTGGCG CACGGCTCGT CGACCTCCTA CAACAAGGTT
TTGCCCAACC CGGGGCTGGC GGTCGGCCAG ACCATGGTGC TCGAGTGGGA CATGTCGCAG
CTGACCAATG GCGGCAGCGA CTGGTCGGAC AGCACCATCA CCAGGTTCTA CCTGTGGATC
AGTGGCGCTG CGGGGGATGT GTTCGAAATC GATTGGATTG CAGTCGGCCA GATCGCGCCG
TCGGCGTCGG TGGCCTCGGT GGTGGATGAG CGTACCGCCC GGATCAGTGG TGATGAGGCG
AACGCTTCGG CTGTCACCGC GCTGGGCAGC AGCCTGACCA CCACCAACCA GAACGTCACC
GCCGCCCAGC AGGCCGCCCA GGACGCGGCC ACTCTGGCGG GTGGTAAAGG CAAGGTGCTG
GTGCAAGCGG CTGCGCCGGC CGTTGCCGAC CGCCTGGCGC AGAACCTGTG GATTGATACC
ACCGGCAATG CCAACACCCC TAAGCGTTGG AATGGCACCG CCTGGGCGGC TGTGACGGAC
AAGGTGGCCA CCGATGCCGC TGCGGCTGCG CAGTCGGCAC TTTCGCAGCT GGCCGGCAAA
GCCGATGCTT CGGCGCTGCA GGCGCTCAGC ACCACGGTGA CCAACCAGGG CAACACGCTG
TCGAGCCAGG GCAATAGCAT CACCGAGCTC AGCAGCAGCC TGCAGACCAC CAACGGCAAC
GTCGCCACGG CCCAGCAGGC TGCCCAGGCG GCGAGCACCT TAGCCGGCAG CAAGGGCAAG
GTGCTGTACC AGTCCGCTGC TCCAGCAGTG GCCGACCGTC AGGCCGAGAA CTTGTGGATC
GACACAACTG GCGCGGCGAA TACCCCCAAG CGCTGGAGCG GCAGTGCCTG GGTGGCCGTC
ACCGACAAGG TGGCGACCGA TGCTGCCGCG GCGGCGGCCA GCGCGCTGGC GCAGGTAGCG
AATAAGGCCG ATGCCTCGGC GCTCCAGGCG TTGAACTCGA CCGTGGCCAG CCAGGGCACC
ACCCTGACCA GTCAAGGCTC CGCGCTGACC CAGCTCAAGG CATCGATCGG GCAGCAGCCC
GATAACCTGA TCCTTCGCGG CAGTTTTGAG GATGGCTTGG TTGAGCCTTG GACTAACAAC
CCGGGAATCA CCAATGTCTC GGCGCATCCA TCGGCAGGGA AGGGCATCTC GTTCTACGAC
AACAGCTTCT GCGGCCTCGG CTTCAATGTG TTGACCAAAG GGGGCGAGCA GTTCGACCTG
GCTGCCGATA TTTGGCCGAA CTACATGACG GCGGGGCAGA CTACCCGCTT GCAGATGCAG
TTCTACGACA AGGCCAACAA CAACCTCGGG TACTTCACCG CGTTCACGGT GGCGGCGGCA
ACCACAGGCT TCAAGACGCA AACCGGTCGC ATCACTGCGC CGGAGGGAGC CGTTTCGGCG
CGGTTCGTGA CCCGTACCGA GCCGGCAGAT GGTACGGGCC GCTCACTGTG GTGCAACATC
CTGGCGCGCC GGGTGACGGC GGCTGACGCG GCCAACGCTG ATGCGGTGAG CAACCTCACC
AGCACTGTCA CCCAGCAGGG CACGACACTG ACCAGCCATG GCCAGGCCCT GACCCAGCTG
AACAATGACC TGCAGAGCGT CGCGCAAGGG AAGGCCGACG CCTCGGCCTT GCAGACATTG
AGCAACACGG TCTCCAGCCA GGGCAACACC CTGAGCAGCC AGGGCACGAG CATCACCCAG
CTGAACAGTG GTCTGCAGAC CACCAACGGT AACGTGACGG CAGCACAGCA GGCTGCCCAG
GCTGCGTCGG ACAAGGCTGG TGCCAAGGGC GAGGTCATCT ATGGCACATC GGCGCCGGCG
GCAGACAAGC GCCTGACGCA GAACCTTTGG ATCGACACCA CAGGAGGGGC GAATACACCT
AAGCGCTGGA TGGGATCGGC CTGGGTAGCC GTGACGGACA AGGCGGCAAC GGACGCAGCC
GCAGCCGCAG CCAGCGCCTT GGCGCAGGTG GCCACCAAGG CTGAGGCCGC CGCGCTACAG
ACGTTGAGTA ACACCGTGAC CAGTCAGGGC AATACGCTGA CCAGCCAGGG TAATGCGCTC
ACCGGGCTGC AGGCCTCGGT CGGCGCGCTG GCCGGCAACG GGGCCAACCT GCTCGACAGC
GCATACAGCT GGCTGGCCTC GACCACCTTG CCGGTGACCG GCGGCACGTT GTTGACCAAA
ACCGGAGTGG CCGTGCCGGA GGCAGACTCC GGGTTCGGCT ACTCGCTCCA AGCAGCTACC
GACAACATCT TCTCCTACAT CGTTCTGGCC CCGGCCAACA CCCAGGCCAG CTACAACATC
CGGGTGGAGC CCGGAGTTTA CCTGGTGTCG ATGTATGTGA AGGGCGGCAC GGCCGGCTCG
ATGATGGCCA ACCTGTATGA CGGGGTGACC TCCCGGTCGG TGATCCTGCC GTACACCACG
GAGCGCACGC GCATCACGTT CCCGATCACC ATCACGGCCA GCGCCAAGGT GGGCTTGTTG
ATCTACCCGA ACCGCCATGC GGCTCCCAGC GCCTCGATGG TGGTGGACTC GATCATGGTC
GAGAAGCGGG TGGGCGAAAG CAACGTCCCT TCGCCATTCG TGGCGGGGCC GTCGGCCCGT
GCAACGGGTG CGCTGGCGGC TGCCAACCAG GCGCTGGATG TGCGGGTGTC GCAGACAGAG
AGCGGCTTGT CATCGACAAG CGCAGCGGTG ACAAACCTGG GCAACAGCCT GCAAACCACC
AACGGCAATG TCACCACCGC CCAGCAGGCG GCGCAGGCTG CTGCTGACCT GGCGGGTAGC
AAGGGTAAGG TGCTTTACCA GACCGCCACA CCGGCTGCTG CTGACCGGCA AGCGGAGAAC
CTGTGGATCG ACACGACCGG CGCTGCCAAC ACCCCGAAAC GATGGAACGG CTCGGCGTGG
ATGGCGGTGA CCGACAAGGT GGCCACGGAT GCCGCCGCGG CTGCGCAGTC GGCACTCACG
CAACTGGCGT CCAAGGCGGA TGCATCGGCG CTGCAGACGC TGCAGTCGAC GGTGACCAGC
CAGGGCAACA CGATCAACAG CCAGGGCAGC TCGCTGACCC AGCTGAAGGC TTCCCTGAGC
CAGCAGCCGG ACAACCTGGT GTTGCGCGGT AGCTTTGAGG ACAGCGTGAT CGATCCTTGG
ACGGCGGGTC CGACCATTTC GAATGTGTCC GCCCACCCGT CGGCGGGCAA GGCCATTTCG
TTCACTGCGA ACAGCTTCTG CGGCATAGCC GCCAACGTGC TGACCACCGG GGGCGAGCAG
TTCGACCTTT CCGCTGACAT CTATCGGGCC AACATGACCG CCGGTCAAAC CGGCAACTTC
CAGATGCAGT TCTTCGATAA GTCGGGGGCG AGCATCAGTT ACTTGAATGC CTTCACGTTC
TCGGCCGGTG GAGGCTTCCA GTCCTTCTCG GGACGGATCA CCGCGCCGAG CAACGCTGTG
TCGGCGCGCT TCGTCACGCG GATACAGCCA GCAGACGGCA CCGGACGTTC GCTGTGGTGC
AACATCGTTG CCCGCCGGGT CACCGCAGCG GATGCGGCCA ACGGCGAAGC GATCAGCACC
TTGGGCACCA CAGTTACGCA GCAAGGCACG ACGCTTACCA GCCAAGGGCA ATCGCTGCTG
AGTCTGACGA ACCGAATGAC CGATGCCGAG GGGGTGAATA GCGCCCAAGC AACAGCCATC
AACCAGATGG ACACGACGGT CAAGCAGCAG GGCACTGCGA TCACTGCAGC TGCCAGCCGC
CTGGACGGGC TGTATGTCCA GGTGAACCCG GAAATGGAAG GCGATAGCAG CGCCATGGCC
GGCGCAACCG GCAGCTTGGT AGGTGTCTGG ACCGAGCAGT CGGCCCGGGT CGAGGAAGGC
ATTGCCATGG GGCGGCAGGT CGAAACGGTG CAGGCACAGG TCGGTGAAGT CGAGGGCTCG
GTGCAGGCTG TCAGCGCATC GGTTCAGCAG GTATCCGAGA CCATTGCCGG CGTAGATGGC
CGAGTATCAG CGATTTCCTC ATGGAAAACC GAGACCAATA GCAAAGGCAA AAAGGTCGCC
ACAGGCATCG TCCAAGGGAG TGACGGGACG ATTGGCGAGA TCCTGTTATC AGCAGACCGC
GTTGCGATCA TCAACGGCCT GGAAGGGGCG GAGGCAAACC TATTTGTATT CCAGAATGGT
CAGCTGTTCT TGAACTCGGC GCTGATTAAC CAAGCGTTCA TCCAGAGCCT GGTCGTGGGC
ATGACGCTTC GGTCACAGGC GGTTAACGCC CAAGGCTTGC CGCTGATCGA GATAAACCTG
ACCACGGGAT CGTTCACTGT GCGCGGCCAG GATGCCAACG GCTCAACTCT GCTCAACAAC
GGAGGCTTGT ATGTGTACGA CGCCAATGGC ACCGAGCGTA CGGCAGTGGG GAGACTTACC
TGA
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| Protein sequence | MSGGVKKIAQ VAVGAVIGFV QGGPVGAAIG AGMAFYMAEQ QEKLNTKSPL RDNEPSAQTV
RSSKAPARFI LGRVSTGGVL VWAQEQAGNQ TDGEWLHLVY VLCEGAVDGL ETIYLGEEDI
ATFGEFASYE LIVNPTQVNA FLNANCPDWK GEQIGRGLSF VRLSLKYSAE KFPSGIPDAR
FVVRGRNDIY DPRTGMAVYT ENTALHILWF LRNRCGVPDD EIVFETFASG ANVCDESVAN
PDGTTSPRYR SSCVIGADEQ RTNVLQKLET ACGGRTIRVG GRWMFQAGAY YGPYDFEITE
DMVVGTITGS TEPTNDAAIN TVRGTFIDTS QSWTETDYPE VSVAEWVIED GGEAAETLTF
SYVTDAYQAQ RLANIELRRR RAGGTINVPL NFLGYNCRPG RAVRVNLPSL NILGEFIVTN
WNMGTNEGCS ASLQQYDAAQ FDDAVGQPYN PIGFIKLPTG GLGSPTGLTW STDDNAESVQ
GTLSWAAPSG VVTSYAVTVR QGATAVQAQQ VPATALKLPL SGLPSGSYTM SVAALGPLTR
SGEASIAVSI DGPPIPESCV VQSTIDTITL IPGNALHGLN GGTYEYFFST NPQATQGDYL
GQGLSLTHTG LAFATNYAYF VRSKNAYGVS AFLKVVASTS TDMENMLGAL KDKIESGQLA
PVLRQEIALI SGPPTQAGSV AQRIAAEATA RGQAIAAEAT ARGQAIAAET TARNQAIATE
VVDRNKAIAV ETQARTKAIS DESAARAQGL LSEAQARGAA ITSEAQARQS ADDSLSQKID
TVTASAGSNA AAIQAEATAR ANADSALGQK IDTVAAGTAS NAAAISNETT ARTTADAAMA
SQIASLRAES GGFDSTLNYG FASTVEGWAG TRCTLTVENG RLVVTNDAAG AYLSAPLVAI
KGRDHDRIRC RITRRAGSGW TGQVTYTTVA HGSSTSYNKV LPNPGLAVGQ TMVLEWDMSQ
LTNGGSDWSD STITRFYLWI SGAAGDVFEI DWIAVGQIAP SASVASVVDE RTARISGDEA
NASAVTALGS SLTTTNQNVT AAQQAAQDAA TLAGGKGKVL VQAAAPAVAD RLAQNLWIDT
TGNANTPKRW NGTAWAAVTD KVATDAAAAA QSALSQLAGK ADASALQALS TTVTNQGNTL
SSQGNSITEL SSSLQTTNGN VATAQQAAQA ASTLAGSKGK VLYQSAAPAV ADRQAENLWI
DTTGAANTPK RWSGSAWVAV TDKVATDAAA AAASALAQVA NKADASALQA LNSTVASQGT
TLTSQGSALT QLKASIGQQP DNLILRGSFE DGLVEPWTNN PGITNVSAHP SAGKGISFYD
NSFCGLGFNV LTKGGEQFDL AADIWPNYMT AGQTTRLQMQ FYDKANNNLG YFTAFTVAAA
TTGFKTQTGR ITAPEGAVSA RFVTRTEPAD GTGRSLWCNI LARRVTAADA ANADAVSNLT
STVTQQGTTL TSHGQALTQL NNDLQSVAQG KADASALQTL SNTVSSQGNT LSSQGTSITQ
LNSGLQTTNG NVTAAQQAAQ AASDKAGAKG EVIYGTSAPA ADKRLTQNLW IDTTGGANTP
KRWMGSAWVA VTDKAATDAA AAAASALAQV ATKAEAAALQ TLSNTVTSQG NTLTSQGNAL
TGLQASVGAL AGNGANLLDS AYSWLASTTL PVTGGTLLTK TGVAVPEADS GFGYSLQAAT
DNIFSYIVLA PANTQASYNI RVEPGVYLVS MYVKGGTAGS MMANLYDGVT SRSVILPYTT
ERTRITFPIT ITASAKVGLL IYPNRHAAPS ASMVVDSIMV EKRVGESNVP SPFVAGPSAR
ATGALAAANQ ALDVRVSQTE SGLSSTSAAV TNLGNSLQTT NGNVTTAQQA AQAAADLAGS
KGKVLYQTAT PAAADRQAEN LWIDTTGAAN TPKRWNGSAW MAVTDKVATD AAAAAQSALT
QLASKADASA LQTLQSTVTS QGNTINSQGS SLTQLKASLS QQPDNLVLRG SFEDSVIDPW
TAGPTISNVS AHPSAGKAIS FTANSFCGIA ANVLTTGGEQ FDLSADIYRA NMTAGQTGNF
QMQFFDKSGA SISYLNAFTF SAGGGFQSFS GRITAPSNAV SARFVTRIQP ADGTGRSLWC
NIVARRVTAA DAANGEAIST LGTTVTQQGT TLTSQGQSLL SLTNRMTDAE GVNSAQATAI
NQMDTTVKQQ GTAITAAASR LDGLYVQVNP EMEGDSSAMA GATGSLVGVW TEQSARVEEG
IAMGRQVETV QAQVGEVEGS VQAVSASVQQ VSETIAGVDG RVSAISSWKT ETNSKGKKVA
TGIVQGSDGT IGEILLSADR VAIINGLEGA EANLFVFQNG QLFLNSALIN QAFIQSLVVG
MTLRSQAVNA QGLPLIEINL TTGSFTVRGQ DANGSTLLNN GGLYVYDANG TERTAVGRLT
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