Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3367 |
Symbol | |
ID | 5871152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3802415 |
End bp | 3803806 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641548483 |
Product | aminophosphonate oxidoreductase |
Protein accession | YP_001669595 |
Protein GI | 167034364 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | [TIGR03329] putative aminophosphonate oxidoreductase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.585702 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.425425 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACCCT TCTGGCTGCA ACAGGCCCTG GAATCGACGC AGGAGGCGGT GTGCCCGCCA CTGCAAGGCG ATGCCCGTTG CGATGTGTGC ATCGTGGGCG GCGGCTACAC CGGCCTATGG ACGGCACTGA TGCTCAAGGA AGCGGTGCCG GCCCTGGATA TCGTGTTGAT CGAGGCCGAC ATCTGCGGCG CCGGTGCCAG TGGCCGCAAT GGTGGTTGCG CCTTGTCCTG GTCGGCCAAG TACTTCACCC TCGAACGCTT GTTCGGGGTG GCCGAGGCGG TACGCCTGGT GCGTGAGTCG GAGCGCAGCA TCGGCGACAT TGGCGCGTTC TGCGCAGCCA ATGGCATCGA CTGCGACTAC CGCCTGGACG GCACGCTGTA CACGGCCACC AATGCAGCCC AGGTGGGTGC CACCGATGCC GTCATCGCCG CGCTGGAACA AAAGGGTATC AACTCGTTCC GCCGCCTGCC GCTGGAGCAG GTGCAGCGCC TGGCAGGTTC TGCGCGGCAT CTGGAAGGCT GGTTCTCGCC GGCCGCCGCC ACCGTGCAGC CGGGCAAGCT GGTGCGTGGC TTGCGCCGGG TGGCCTTGCA GCGTGGCGTG CGTATCTTTG AGGGTACCGC CATGACTGGC CTGGAGCATG GCGCCCCGGT GCAGGTGCGC ACGGCCCATG GCACGCTGCG CGCCGACCGC GTGGTGTTGG GCCTCAATGC CTGGATGGCG CGGGCCTTCC CGCAGTTCGA GCGCAGCGTG GCGATTGTCT CCAGCGACAT GGTGATTACC GAACCGTGCC CCGAGCTGTT GAGCCAGATC GGCCTGGACA GCGGTATCAG CGTGCTCGAC TCGCGTATTT TCGTGCACTA CTACCACAAC ACCGCCGATG GCCGGCTGAT GCTCGGCAAG GGCGGCAACA CGTTCGCCTA CGGCGGGCGC ATGTTGCCGG TGTTCGACCA GCCGTCGCCG TACCGCCCCT TGCTGCGCGA AAGCCTTGGC GGGTTTTTCC CGGCCTTGGC CGAGGTGCCA CTGGCGGCCA GCTGGAACGG GCCGTCGGAC CGCTCGGTGA CCGGTTTGCC GTTCTTTGGT CGCTTGGACG GGCAGGGCAA CGTGTTCTAC GGCTTTGGTT ACTCCGGCAG CGGCGTTGGC CCGTGCCATA TGGGCGGGCA GATTCTTTCG TCGCTGGCGC TGGGGCTGGA CAACCCGTGG ACCCGCTCGC CACTGGTCAA AGGGCCGCTG GGCCTGTTCC CGCCCGAGCC GATCCGCTAC CTGGGCTCAC TGCTGGTGCG CAATGCCATT CGCCGCAAGG AGCACGCCGA AGATCGCGGT TTGCGCCCGC GCCGGTTGGA TGTGCGGTTG GCGCGGTTTG CGGCGGCGGC GGGCAAGGCC GATAAAGGCT GA
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Protein sequence | MRPFWLQQAL ESTQEAVCPP LQGDARCDVC IVGGGYTGLW TALMLKEAVP ALDIVLIEAD ICGAGASGRN GGCALSWSAK YFTLERLFGV AEAVRLVRES ERSIGDIGAF CAANGIDCDY RLDGTLYTAT NAAQVGATDA VIAALEQKGI NSFRRLPLEQ VQRLAGSARH LEGWFSPAAA TVQPGKLVRG LRRVALQRGV RIFEGTAMTG LEHGAPVQVR TAHGTLRADR VVLGLNAWMA RAFPQFERSV AIVSSDMVIT EPCPELLSQI GLDSGISVLD SRIFVHYYHN TADGRLMLGK GGNTFAYGGR MLPVFDQPSP YRPLLRESLG GFFPALAEVP LAASWNGPSD RSVTGLPFFG RLDGQGNVFY GFGYSGSGVG PCHMGGQILS SLALGLDNPW TRSPLVKGPL GLFPPEPIRY LGSLLVRNAI RRKEHAEDRG LRPRRLDVRL ARFAAAAGKA DKG
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