| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3226 |
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| Symbol | |
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| ID | 5871011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3614569 |
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| End bp | 3614979 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641548342 |
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| Product | type VI secretion system lysozyme-related protein |
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| Protein accession | YP_001669454 |
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| Protein GI | 167034223 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3518] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03357] type VI secretion system lysozyme-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGGGC TTTTTGATCG CTTGAAGCTG GATCAGTGCA TCAGCCGGAA GGCCTCCCGG
CGGGAGAGCG CTTCCCACAA ATTCGCCGCC ATCAAGCGCC ACCTCGAAAC GCTGCTCAAT
GCCCGCCAGG GGTGCTCACA GAGCAGCCCT GAGCTAGGCC TGCGCGACTT CAACGGGCAT
GACGCAAACA ACGGCGACTT GCTCGTACAG GTGAGCGCGG ATATCCGCCG CACGCTCCAG
CGATTCGAGC CACGCATACG AGTGCGCACG CTAAAAGCAG TGCCTGATGC CCATACCCCG
CTAGAGCTGC ATTTCAAGCT GGACTGTCTG GTACGGGTCA ACAACCACAC TGAGCAGCTG
CAACTTGAGC TGCTGGTCAA CGGGCACAAC CGCTACACCC GAGTGAGGTG A
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| Protein sequence | MSGLFDRLKL DQCISRKASR RESASHKFAA IKRHLETLLN ARQGCSQSSP ELGLRDFNGH
DANNGDLLVQ VSADIRRTLQ RFEPRIRVRT LKAVPDAHTP LELHFKLDCL VRVNNHTEQL
QLELLVNGHN RYTRVR
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