Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3215 |
Symbol | |
ID | 5871000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3600287 |
End bp | 3600961 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641548331 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001669443 |
Protein GI | 167034212 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCCA TCCAGCTTCG GCCGGTTTCG AAGCTTTCTG CAGAACAACA AGCCACCGAA AGCCTTCGTG AATCGATCTT GTCGGGGCAT CTGAAGCCCG GTGAGCGCAT TACCGAAACG GCACTTGCCG ATCAGTTGGG CATCGCCCGC GGCACCTTGC GCACCGGCCT GAACCGGTTG GCGACAGAGG GGATCGTGGT GCAGACGCCG TATGTGGGCT GGCAAGTGGC TGAGCTGACA GCCGACGACA TCTGGGAAAT CTGGACGCTG CGTGGCAGCC TGGAACGGCT GGCCGCCACA CTGGTGGCCA AGCAAGGCGA TGCGCAGGTG CTGCAGGCGA TCGAAGCGGC GTTTCTGGCG CTGCAGAAGG CCTGTGCCAA AGGGACACGC AAGGCCATCA ACCAATGCGA CTTCACCCTG CACCAGGCCA TTATCGAAGG TACCGGCCAC CAGCGTCTGA TCCGCCAGTA CGCACTGGTA CAGCAGCAAG TGCGCTGGGT CATCAACACC ACCAACCTGC TGATGCATAC CAGCCCCGAG ACCATCCTGG AGCAGCATCA GGCCTTTGTA CAGGCGATCC TCAAGGGCGA GAGCGAGACT GCCGGCGAAC TGGCCTGGCA GCACAATGCC TACGATGGCG AACGGCTGGT GCAGTGGGTG CAGGGGAACG CCTGA
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Protein sequence | MKSIQLRPVS KLSAEQQATE SLRESILSGH LKPGERITET ALADQLGIAR GTLRTGLNRL ATEGIVVQTP YVGWQVAELT ADDIWEIWTL RGSLERLAAT LVAKQGDAQV LQAIEAAFLA LQKACAKGTR KAINQCDFTL HQAIIEGTGH QRLIRQYALV QQQVRWVINT TNLLMHTSPE TILEQHQAFV QAILKGESET AGELAWQHNA YDGERLVQWV QGNA
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