| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2770 |
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| Symbol | |
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| ID | 5870556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3108562 |
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| End bp | 3109284 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641547888 |
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| Product | hypothetical protein |
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| Protein accession | YP_001669000 |
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| Protein GI | 167033769 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3521] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03352] type VI secretion lipoprotein, VC_A0113 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0124762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.552799 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACACA AGCACATCGC CTTCAAGCGC CTGACCACCG CCGCCCTGCT GCTGGCGCTG
GCGGGCTGCG GGGTCACCGA CCGTATCGGC AAACGCATGG AGGACAGCTG GGCGGCCGAC
ATGCTGGCTG ACAGCGAGAA GGTCATCCTG ACCTCCGACG GCGGCAACCA GCTCAACCCC
GATACCGAGG GCAAGCCGCT GTCGGTGGTG ATGCGCGTGT ACCAGCTGAC CGACCTTGAG
CGCTTCGCCG CAACCGATGC CGAAACCCTG TGGGATACCC CGGAAAAGGC ACTGGGCAAT
ACCCTGGTGG AAGCCCGCGA GATCACCCTG CTACCGGGCA TTGGCCAGAT CGACCAGTGG
CCTCTGGCCA ATAGCGCTCG CTACGTCGGC GTGGCGGCGT TCTTCCGTGA TGAACAAGGC
GCACGCTGGA AAGTCGCCTT CGACGCAAAC TCGCTGCGCA AGGACGGCAT CTGGTTCTCA
TCCGACGGGC TGCGGGTACT GGTGGATAAA ACCGAAATCA GTGCCATGCG GGGCGTGGAT
GTGCTGAACA AACCCCCGAC TGCCGACCAG CTCGCGGCGG CGCAGAAGGC CAAGGATGCC
GCCCCGACGC TCACCGACAA GGTGCAGGAC GCGGTCATCC AAAAAGCCAG CGACGCCGCC
AGCCAGTCGG CCAGCAACGC CATGGATTCA ACCTTCAACT CTTTAGTGGA TAGCGTCAAA
TGA
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| Protein sequence | MQHKHIAFKR LTTAALLLAL AGCGVTDRIG KRMEDSWAAD MLADSEKVIL TSDGGNQLNP
DTEGKPLSVV MRVYQLTDLE RFAATDAETL WDTPEKALGN TLVEAREITL LPGIGQIDQW
PLANSARYVG VAAFFRDEQG ARWKVAFDAN SLRKDGIWFS SDGLRVLVDK TEISAMRGVD
VLNKPPTADQ LAAAQKAKDA APTLTDKVQD AVIQKASDAA SQSASNAMDS TFNSLVDSVK
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