| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1857 |
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| Symbol | |
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| ID | 5869637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2085524 |
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| End bp | 2086540 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641546974 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001668096 |
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| Protein GI | 167032865 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.18222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGATTG GCGCGAACGA CACTATGCGG GCAAAAACTG ACACCCCAGC CAGCCTGGAC
ATCGGTCTGC TGCTGTACCC CGGCGTGCAG CGCGCCGCCG TGCATGGGCT GGCCGACCTG
TTCCTGGTGG CCAACCGGGT TGCGGCCGAG CTGGGTGGCG TTGGGTTGCC GACTATTCGC
GTCAGCTTCT GGCAGGCAGA TGAATTGGGA CGATTGCTGC CTGCCCCGGA TAGCCCGGCT
GATGCCGGGC TGGGCTTGCG CGTTTTGATC ATTCCGCCGA GCCTGGAGTC GGCTCCGCAA
GCCGAGCTGC TCGAACGTCA CCGCGCGTTG CTGTGCCAAC TGCACGTGCA GGGTACGGTG
CTGGCGTCAG TATGTATCGG GGTGTTTTTC ATTGCCGCCA GCGGCCTGCT GGACGGGCGC
CCGGCCTGCA CCCACTGGAA CTATGTACAG GCGCTTGCAC AGCGCTTCCC CAAGGTGCGG
GTAGAGGCCC AGCAGCCGTT GCTGGATGAC GGGGACATCG TGACCTCGGC CGGGCTCATG
GCCTGGACCG ACTTGGGCTT GCGCCTGCTG GAGCGCTTTC TGGGGGCTAC GGTGGCACGG
GAGACCGCCC GCTATCTGGC CGTCGATCCG GTCACGGCGA CGCTGCCCGG GGCTGTATTC
AGCCCGCGCC TGGATCACGG TGACGAGGCC GTGCTGAAAG TACAACACTG GTTGCAGGGC
AATGGTGGGC AGGATGCCGA CCTGGCCGCG ATGGCTGCCT GCGCGGGGCT GGAGGCGCGG
ACCTTCTTGC GGCGATTTCG TGCTGCTACC GGGCTACGCC CGACCGAGTA CTGCCAGCAG
GTCAGGGTAG GGCGGGCGTG CCGTTTGCTG GAGTTTACCC GGCGCAACGT CGAACAGATC
GCCTGGGGTG TGGGCTACCA GGATCCGGGC GCCTTCCGCA AGGTGTTCCA ACGCGTCACC
GGCTTTACCC CGAGCGACTA TCGGCGGCGG TTTGCGGTGT CCGATCAGGG TATGTAG
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| Protein sequence | MRIGANDTMR AKTDTPASLD IGLLLYPGVQ RAAVHGLADL FLVANRVAAE LGGVGLPTIR
VSFWQADELG RLLPAPDSPA DAGLGLRVLI IPPSLESAPQ AELLERHRAL LCQLHVQGTV
LASVCIGVFF IAASGLLDGR PACTHWNYVQ ALAQRFPKVR VEAQQPLLDD GDIVTSAGLM
AWTDLGLRLL ERFLGATVAR ETARYLAVDP VTATLPGAVF SPRLDHGDEA VLKVQHWLQG
NGGQDADLAA MAACAGLEAR TFLRRFRAAT GLRPTEYCQQ VRVGRACRLL EFTRRNVEQI
AWGVGYQDPG AFRKVFQRVT GFTPSDYRRR FAVSDQGM
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