Gene PputGB1_1096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1096 
Symbol 
ID5868855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1244388 
End bp1245053 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content65% 
IMG OID641546195 
ProductCheW protein 
Protein accessionYP_001667340 
Protein GI167032109 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.153582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGTG AATCCGCGAT GCAGTTGCTG GCCGAGGATG ACGCGCACAT CGACGACTGC 
TGGAACCGCA TTGGCGTGCA TGGCGACAAG CAGTGCCCGC TGCTGGAGCA GCATGTTCAT
TGCCGCAATT GCGAGGTGTA TGCCGCCGCG GCCACGCGTT TGCTCGACCG CTATGCGCTG
ATGCAGGACC ACCAGGCTGC AGTAGCGCAG CCGGTCGAAG AAAACACCGG CCGCTCCGTG
CTGCTGTTCC GCCTGGGCGA AGAGTGGCTG GCGCTGGCTA CCGCCTGCCT GGCCGAGATC
GCCCCGTTGC AGGCGGTGCA TTCGCTGCCG CATCAGCGCT CGCGGCTGCT GCAGGGGGTT
GCCAATGTGC GCGGTGCGTT GGTGCCGTGC CTGTCACTGG CTGACTTGCT GGGTGTGCAA
GCCGGTACCG CCGAGCAGCG TGGTGGCCGG GCGATGCCAC GCATGCTGAT TCTGGCCGCC
GAAGGTGGGC CGGTGGTGAT GGCCGTCGAG GAAATCGACG GTATTCACCG GCTCGACCCA
CTGTTGCTTG GCAGCGGCCA GGACGCCACA CGCTTCACCT CCGCAGTCCT GCAGTGGCGC
GGCCGCAGTG TGCGGGTGCT GGACGATCAA CACTTACTGT CTGCCGTGCA GCGGAGCTTG
TCATGA
 
Protein sequence
MNSESAMQLL AEDDAHIDDC WNRIGVHGDK QCPLLEQHVH CRNCEVYAAA ATRLLDRYAL 
MQDHQAAVAQ PVEENTGRSV LLFRLGEEWL ALATACLAEI APLQAVHSLP HQRSRLLQGV
ANVRGALVPC LSLADLLGVQ AGTAEQRGGR AMPRMLILAA EGGPVVMAVE EIDGIHRLDP
LLLGSGQDAT RFTSAVLQWR GRSVRVLDDQ HLLSAVQRSL S