Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1093 |
Symbol | |
ID | 5868852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1240986 |
End bp | 1242608 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641546192 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001667337 |
Protein GI | 167032106 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.196472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAAACT GGACCTTGCG CCAACGGATC CTGGCAAGTT TCGCCGTGAT CATCGCCATC ATGCTGCTGA TGATCGTGGC CGCCTATTCG CGGTTGGTGA CCATCGAAAC CGCCGAAGAG GCGGTAGGGA CCGACAGCAT TCCCGGGGTC TACTACAGCT CGATGATCCG CAGCGCCTGG GTCGATAGCT ACGTCACCAG CCAGCAACTG GTGGGCCTGT CCAACCACCG TGAAATCACT TCGGCCGACA TGGAGCTGTT CAAAAGCTTC GAAGACCGGC TCAAGCAACA CATGGCCAGC TACCAGGCCA CCATCCAGGA CAAGGATGAT CAAACCCGCT TCGACAACTT CGTGCAGTTG GAAGAGGGCT ACCTGAAGAT CGTCAACCAG GTGCTGGATA CTTACCGCCA GCACAACTAC GCCGAAGCCG AACGGCTGAT CATCGAAGTG CTGACCCCGG CCTGGGTAGA TGGGCGCAAG CACTTGAATG AAGTGATCGA GAACAACCGG GCATCAGCCG ACGCCGCCAC CAACGAGATC GTCAGCGCCG TGAGCACGGC CAAGGGCAGC ATGGTCGTTT CGCTGCTGCT GGCAATCGTT GCCGCTGGCA TCTGCGGCTT GCTGCTGATG CGCGCCATCA CCGCGCCCAT GCAACGTATC GTGCATGCCC TCGACAAGCT GCGCTCGGGC GACCTGAGCA TGCGCCTGAG CCTGGACCGC AAGGACGAGT TCGGTGCCAT CGAAAGCGGT TTCAACGAGA TGGCCGAAGC ACTGGCCAAC CTGGTAGCCC AGGCGCAACG TTCGTCGGTG CAGGTGACCA CCTCGGTTAC CGAAATTGCC GCCACGTCCA AGCAACAGCA GGCCACCGCC ACCGAAACGG CCGCCACCAC CACCGAAATC GGCGCCACCT CGCGAGAAAT CGCCGCCACT TCGCGCGACC TGGTGCGCAC CATGACCGAA GTGACGACCG CCGCTGACCA GGCCTCCAGC CTGGCAGGCT CCGGGCAGCA GGGCCTGGCG CGCATGGAAG AGACCATGCA CCAGGTGATG GGCGCAGCCG ATCTGGTCAA CGCCAAGCTT GGCATCCTCA ACGAGAAAGC CAGCAACATC ACGCAGATGG TGGTCACCAT CGTCAAGGTT GCCGACCAGA CCAACCTGCT GTCGCTCAAC GCCGCCATCG AGGCAGAAAA GGCCGGCGAA TATGGCCGCG GCTTTGCCGT GGTCGCCACC GAAGTGCGCC GCCTGGCCGA CCAGACCGCC GTCGCCACCT ACGACATCGA GCAGATGGTG CGCGAGATCC AGTCGGCCGT GTCGGCTGGG GTCATGGGCA TGGACAAGTT CTCCGAAGAA GTGCGCCGCG GCATGTTCGA AGTACAACAG GTGGGCGAGC AGCTCAGCCA GATCATCCAC CAGGTGCAGG CCCTGGCACC GCGCGTGCTG ATGGTCAACG AAGGCATGCA GGCCCAGGCC ACCGGTGCCG AGCAGATCAA CCAGGCGCTG GCCCAGCTCA GCGATGCCAG CACCCAGACC GTCGAGTCGC TGCGCCAGGC CAGTTTTGCC ATCGATGAGC TAAGCCAGGT GGCCGCGGGC CTGCGTGGCG GCGTGTCGCG CTTCAAAGTC TGA
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Protein sequence | MKNWTLRQRI LASFAVIIAI MLLMIVAAYS RLVTIETAEE AVGTDSIPGV YYSSMIRSAW VDSYVTSQQL VGLSNHREIT SADMELFKSF EDRLKQHMAS YQATIQDKDD QTRFDNFVQL EEGYLKIVNQ VLDTYRQHNY AEAERLIIEV LTPAWVDGRK HLNEVIENNR ASADAATNEI VSAVSTAKGS MVVSLLLAIV AAGICGLLLM RAITAPMQRI VHALDKLRSG DLSMRLSLDR KDEFGAIESG FNEMAEALAN LVAQAQRSSV QVTTSVTEIA ATSKQQQATA TETAATTTEI GATSREIAAT SRDLVRTMTE VTTAADQASS LAGSGQQGLA RMEETMHQVM GAADLVNAKL GILNEKASNI TQMVVTIVKV ADQTNLLSLN AAIEAEKAGE YGRGFAVVAT EVRRLADQTA VATYDIEQMV REIQSAVSAG VMGMDKFSEE VRRGMFEVQQ VGEQLSQIIH QVQALAPRVL MVNEGMQAQA TGAEQINQAL AQLSDASTQT VESLRQASFA IDELSQVAAG LRGGVSRFKV
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