| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0833 |
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| Symbol | |
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| ID | 5868592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 944981 |
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| End bp | 946315 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641545933 |
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| Product | outer membrane porin |
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| Protein accession | YP_001667079 |
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| Protein GI | 167031848 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.78414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTTCCG CGTTTCGTTT TACCCCGCTT TTCATTGCGT TGACTGCAAC GATCCCTTTC
GCCGCCCAGG CAGATGAAGA CAAGGCTGAT GGCTTCATCG AAGGGTCGTC CTTCAACCTG
CATTTTCGTA ATGCCTACTT CAACCGCGAC AACCACAACG CTGGCGTGCG CGACACCCGC
GAATGGGGCC AGGGCGCGGT TGCGCGCTTC GAGTCGGGTT ACACCCCCGG TGTCATCGGC
TTTGGCCTGG ACGCCCATGC CATGTTGGGC CTGAAGCTCG ACGGCGGTGG CGGCCATGCC
GGCACCAGCA TCCTGCCTGA GCACATCAAG GACGACGGCG AACTGGGGGC TGCCCCGCAC
TCGTTCTCCA CGGCTGGCGC TGCGGTCAAG CTCAAGGCCT TCGACACCGA ACTGAAAGCT
GGTGACCTGT TCCTCACCAA CCCGGTGATC GCCGGCGGCG AAACCCGCAT GCTGCCGCAA
ACCTTCCGTG GTGTGAGCCT GACCAACACC AGCATCGACG GCCTGCTGCT CGAAGGCGGC
CAGGTGAGCT TCACCCACCC CTACAACCAG AGCGGCCACC GCCGCATCGA CACCTACTAC
GGGTCGCTGG ACGAGCACGA CAAGAGCAAG CACCTGAACT GGGCCGGCGC ATCGTGGAGC
GGTACCGAGA ACATCACCGC CAACCTGTAC GCCGCCGAGC TGAAGGACAT CTGGAACCAG
TACTACGCTG ACTTCGACTA CACCTACGTG GTCAATGACC TGGTCAGCCT GAACCCGGGC
GTGCACTTCT ACCACACCCA GGACACCGGC CAGGCCCTGC TGGGCAAGAT CGACAACAAC
ACCTACAGCG TGCACTTCAC CGTCAACGCC GGGTTCCACA GCATCACCGC CGCCTACCAG
CGCGTGAACG GCAACACGCC GTTCGACTAC ATCAACCTGG GCGACAGCGT GTACCTGGAC
AACTCGCGCA TGTACTCGGA CTTCAACGCG CCGAACGAGC GCTCGTGGAA GCTGCAGTAC
GACTATGACT TCGCCGGTGT CGGCGTGCCA GGCCTGACCA CTTCGCTGTC GTACTCGCGC
GGTGAAGCCG ACCTGACCAA GGCCACCCAG GACACCACGC ATTACGACTA CTACCGGGAA
GATGGCAAGA ACGCCATGCA CTGGGAACGC GACCTGGACG TGAAGTACGT GTTCCAGGCG
GGTGACCTGA AGGACCTGTC GGTACTGGTG CGCTACGCCA CCCACCGTGG CAGCCAGGGT
TATGCGTCGA TCGACAGCAA CAGCGACAAC GACGAAGTAC GCGTGATCGT GGATTACCCG
CTTAACGTGT TCTGA
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| Protein sequence | MPSAFRFTPL FIALTATIPF AAQADEDKAD GFIEGSSFNL HFRNAYFNRD NHNAGVRDTR
EWGQGAVARF ESGYTPGVIG FGLDAHAMLG LKLDGGGGHA GTSILPEHIK DDGELGAAPH
SFSTAGAAVK LKAFDTELKA GDLFLTNPVI AGGETRMLPQ TFRGVSLTNT SIDGLLLEGG
QVSFTHPYNQ SGHRRIDTYY GSLDEHDKSK HLNWAGASWS GTENITANLY AAELKDIWNQ
YYADFDYTYV VNDLVSLNPG VHFYHTQDTG QALLGKIDNN TYSVHFTVNA GFHSITAAYQ
RVNGNTPFDY INLGDSVYLD NSRMYSDFNA PNERSWKLQY DYDFAGVGVP GLTTSLSYSR
GEADLTKATQ DTTHYDYYRE DGKNAMHWER DLDVKYVFQA GDLKDLSVLV RYATHRGSQG
YASIDSNSDN DEVRVIVDYP LNVF
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