Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0391 |
Symbol | |
ID | 5868129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 456828 |
End bp | 457559 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641545471 |
Product | phosphoribosyltransferase |
Protein accession | YP_001666638 |
Protein GI | 167031407 |
COG category | [R] General function prediction only |
COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
TIGRFAM ID | [TIGR00201] comF family protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.214316 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACTGTC AACCACACTG GAAAAGGCTG GTTTACAAGT GCTCACTTAT TAATCAAACG TGTTTACTGT GCGATGAGCC TGCCGAGCAG CGCTACCCAT TGTGCACCGC CTGCGAGCAG GAACTGCCCT GGCTGGGTGA TCACTGCCAG CATTGTGCCC TGCCCTTGCC CATGGCCGGG CTGACTTGCG CCCAGTGCTG CCGCCGCTTG CCGGCCTTCG ATCAGGTCAT TGCCCTGTGG CACTACGGCT TTCCGGTGGA CACGTTGATC AGTCGCTTCA AGCACAATCG TCAATGGCCA GTGGGGCGTT TGATGGCCGA GTTACTCGGG CATGGGCTGC TGCACCGCTT TGCCGAAGGG CTACCCCGCC CAGACCTGCT GTTGCCTGTG CCCCTGGCAA GCCGTCGACT GCGGGAACGA GGGTTCAACC AGGCGGGGAT GCTTGGGCGT TGGTTGTCTT CGCAACTGCG GCTACCTTGC GATGAGCGAT TGCTGATGCG CACGCGCGAA ACGACTGCGC AGCAACAGCT GACTGCCAAG GCAAGGCGAC GCAACTTGCG TCAGGCGTTT GCGGTCACTG GCAAGCTGAC AGGTAAGCAT GTCGCTGTTG TCGACGATGT GTTGACCACC GGTGCCACCG CGCAGGCCAT TGCTCAGGTG CTGCGCAAGG CCGGAGCGCG ACAGGTAGAT GTGTATTGCC TGGCACGCAC GCCCAAACCA GGGTATGCAT GA
|
Protein sequence | MNCQPHWKRL VYKCSLINQT CLLCDEPAEQ RYPLCTACEQ ELPWLGDHCQ HCALPLPMAG LTCAQCCRRL PAFDQVIALW HYGFPVDTLI SRFKHNRQWP VGRLMAELLG HGLLHRFAEG LPRPDLLLPV PLASRRLRER GFNQAGMLGR WLSSQLRLPC DERLLMRTRE TTAQQQLTAK ARRRNLRQAF AVTGKLTGKH VAVVDDVLTT GATAQAIAQV LRKAGARQVD VYCLARTPKP GYA
|
| |