| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0001 |
|---|
| Symbol | rnpA |
|---|
| ID | 5873260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 4 |
|---|
| End bp | 408 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641545074 |
|---|
| Product | ribonuclease P |
|---|
| Protein accession | YP_001666253 |
|---|
| Protein GI | 167031022 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0594] RNase P protein component |
|---|
| TIGRFAM ID | [TIGR00188] ribonuclease P protein component, eubacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTGAGTC AGGACTTCAG TCGGGAAAAG CGACTGCTTA CACCCCGGCA TTTCAAAGCG
GTCTTCGACT CCCCAACCGG CAAGGTTCCA GGGAAAAACC TGCTGATCCT TGCTCGCGAG
AACGGCCTCG ATCATCCACG CCTAGGCCTG GTAATCGGCA AGAAGAGCGT CAAGCTCGCC
GTTCAACGCA ACCGCCTCAA GCGCTTGATG CGCGATTCCT TTCGTCTGAA CCAGCAATCG
CTTGCCGGCC TGGACATCGT GATCGTCGCG CGCAAGGGAT TGGGTGAGAT TGAAAACCCG
GAATTGCACC AACACTTTGG CAAGCTCTGG AAACGCCTGG CGCGCAGCCG GCCAACACCA
GCAGCCACCG CCAATTCCGC AGGGGTAGAC AGCCAAGATG CGTAA
|
|---|
| Protein sequence | MVSQDFSREK RLLTPRHFKA VFDSPTGKVP GKNLLILARE NGLDHPRLGL VIGKKSVKLA
VQRNRLKRLM RDSFRLNQQS LAGLDIVIVA RKGLGEIENP ELHQHFGKLW KRLARSRPTP
AATANSAGVD SQDA
|
|---|
| |