Gene Mext_2055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_2055 
Symbol 
ID5834565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2290688 
End bp2291014 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content64% 
IMG OID641367853 
Producthistone family protein DNA-binding protein 
Protein accessionYP_001639522 
Protein GI163851479 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00987] integration host factor, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.283238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGCA AGACGGTCAC ACGCGCAGAT TTGAGCGAGG CCGTCTACCA GCAGGTCGGT 
CTGTCACGGG CCGAATCGGC CGCGCTGGTC GAGACGGTGC TTGCCGAGAT CTGCACGTGC
CTATCCTCGG GCGAGACGGT GAAACTGTCC TCGTTCGGCT CCTTCGTCGT GCGCTCCAAG
GGCAAGCGCA TCGGCCGCAA TCCGAAGACC GGTGTCGAGG TCGAGATCGA GCCGCGGCAG
GTGATGGTGT TCAAGCCCTC GAACGTGCTC AAGGCCCGCA TCAATGGCGG CCACGTCAAC
GGGCTCGACA TGGATGAGGA CGAGTGA
 
Protein sequence
MAGKTVTRAD LSEAVYQQVG LSRAESAALV ETVLAEICTC LSSGETVKLS SFGSFVVRSK 
GKRIGRNPKT GVEVEIEPRQ VMVFKPSNVL KARINGGHVN GLDMDEDE