| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1920 |
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| Symbol | |
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| ID | 5835152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 2138272 |
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| End bp | 2139024 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641367720 |
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| Product | TIR protein |
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| Protein accession | YP_001639390 |
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| Protein GI | 163851347 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.417099 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCCC GCGCCCGCAC GCACACCGAG AAGCCCGGCC CCACGTCCAA GACGGCGGCC
AAGGCGAAGC CTGGACCGCG CTCCCCGGCC AGGCCGGCGG TCCCGCGCCC GAAGCCGGAG
AAGCCCGAGG TCCGGATCTT CGTCTCGTAC TCGCACCGGG ACGCCGACGC CCGCCAGCGG
CTGGAGACCC ACCTCGCGCC CCTGAAGCGC GAGGGCGTCA CGACCTGGTT CGACGGCGAC
ATGAACGCCG GCGACAAGCT CGACACCGGG ATCGCGCGGG CGCTGCGCAA CGCCCACGTC
TTCGTCGGCC TGCTCAGCCC CGACTACCTC GCGAGCAACT ACTGCTGGAA GATCGAGTAC
AAGCGCGCCA TGGGCCGCCG CGCGAACGGC ACGATGCGCG TCGTCGCGGT CGTGCTGCGC
CCCTGCGACT GGAAATCGAC CACCGCGGCC GGTTTCAAGC TGCTGCCGGA GGACGGCAAG
GAGGTCACCC GCTGGCGCAG CGCCGACGAC GCCTTCCTCA ACGTCGCCCA GGGCATCCGG
CGCGTGGTCG CCGACGTCCG CAAGACCATG GCCGCGGCGC CACCCAAGCC AGCCCCGAGG
AAGCCGGCCG CCTCGAAAGC TGCGGCGCAG CCGCCGACCA AGCCCGGCCC GAAGCCTCGC
CAGAAGCCGG GCCCGAAGCC CAACCCAGGT CGCGCAGGCG CAGGAGCGGT CGCAAGGAAG
CGCAAGCCGC CGGCCAAGGG GCGCAAACCC TGA
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| Protein sequence | MRARARTHTE KPGPTSKTAA KAKPGPRSPA RPAVPRPKPE KPEVRIFVSY SHRDADARQR
LETHLAPLKR EGVTTWFDGD MNAGDKLDTG IARALRNAHV FVGLLSPDYL ASNYCWKIEY
KRAMGRRANG TMRVVAVVLR PCDWKSTTAA GFKLLPEDGK EVTRWRSADD AFLNVAQGIR
RVVADVRKTM AAAPPKPAPR KPAASKAAAQ PPTKPGPKPR QKPGPKPNPG RAGAGAVARK
RKPPAKGRKP
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