Gene Mext_0481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0481 
Symbol 
ID5833518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp524921 
End bp526312 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content63% 
IMG OID641366260 
Productintegrase catalytic region 
Protein accessionYP_001637969 
Protein GI163849926 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACAGG TTCTCCACGG CAGCGCCACG ACGACTGCGA CGGTCCGTCG GGCAATCCAA 
GCTCGTCAAG AGAGCGTGAG GGCCGCTGCC AAGCGCTACG GCATCAGCCC CACGACGGTG
CAGAAGTGGC GCTCACGCCA GACCAGCACG GATGCACGGA TGGGGCCGAA GGAGCCCCGC
TCCAGCGTGC TCAGCCTGGA GGACGAGGCG GTCATCGTCG CCTTCCGGCG GCACACCCTG
CTGCCGCTCG ACGACTGCCT CTACGCGCTG CAGCCGAGCC TGCCGCATCT GACCCGCTCG
TCACTCCACC GCTGCCTGCA GCGTCACGGC ATCAGCCGCC TGCCGGATGT GGACGGCGAC
AAGCCTAAGC GGTCGCGCTT CAAGGCCTAC CCGATCGGCT ACTTTCACAT CGACATCGCA
CAGGTCAGCA CGGAACAGGG CAAGCTGCAC CTGTTCGTGG CCATCGATCG CACGAGCAAG
TTCGCATTCG TTCAACTGCA CGGACGAGCA ACTCAACGGA TCGCGGCAGC CTTTCTACAC
GATCTGGTCG CCGCCGTGCC GTACACGATC CACACGGTGC TGACGGATAA TGGCATCCAG
TTCACCGACA ACCATCCGGT GGACGAGGAG GCCGAGGCTA AGGCGGCAGC TTATTGGGCC
GAACGCGACG AGCCACGCAT CTACCGCTGG CACTCGTTCG AGTGGGCCTG CGAGCAGACC
AAGATCGAGC ATCGCCTGAC CAAGCCGCGC TGCCCGTGGA CGAATGGCCA AGTCGAGCGG
ATGAACCGCA CCATCAAGGA CGCCACGGTC AAGCGCTACC ATTACGCCAG CCACGACGAG
CTCCGGATGC ACCTGCAGCT GTTCGTGGAT GCCTACAACT ACGGCCGCCG ACTCAAGACC
CTGCGCGGCC TCACACCTTA TGAGTTCATC TGCCAGACCT GGACGAAAGA GCCCGAACGC
TTCAGGCTCG ATCCGTCACA CCACATGCCG GGACCGAACA TCTCTAGTCA GCTGATTGCG
ACGTTCGACG ATCTGGATAG GCGAGGGATC GAACTGCGCT CTCTGACAGA AGTGATCGAC
ACAACGACTT CGGGCGGGAA GCTTGTGTTC CACATCTTCG GCGCACTGGC CGAGTTCGAA
CGATCGATCA TCCGCGAACT GACGTTGTCT GGCCTGATTG CAGCTCGGGC GAGAGGTCGA
TTAGGGGGTC GCCCGAAGCT GCTGAGCTCA GCAGACCTCG ACGTCGCTCG GGTGCTGTTG
CGGGATGGGA CGCTGACGGT CAGCGAGGTG GCAGCACGAC TTGGGGTGAT CGCCTCGACG
CTATACCGCT ACCTCCTTGC CGCCCGATCG ACCAACCCAA AACAGCTTAA CGAAGCGGTA
CCAGTGCCGT GA
 
Protein sequence
MGQVLHGSAT TTATVRRAIQ ARQESVRAAA KRYGISPTTV QKWRSRQTST DARMGPKEPR 
SSVLSLEDEA VIVAFRRHTL LPLDDCLYAL QPSLPHLTRS SLHRCLQRHG ISRLPDVDGD
KPKRSRFKAY PIGYFHIDIA QVSTEQGKLH LFVAIDRTSK FAFVQLHGRA TQRIAAAFLH
DLVAAVPYTI HTVLTDNGIQ FTDNHPVDEE AEAKAAAYWA ERDEPRIYRW HSFEWACEQT
KIEHRLTKPR CPWTNGQVER MNRTIKDATV KRYHYASHDE LRMHLQLFVD AYNYGRRLKT
LRGLTPYEFI CQTWTKEPER FRLDPSHHMP GPNISSQLIA TFDDLDRRGI ELRSLTEVID
TTTSGGKLVF HIFGALAEFE RSIIRELTLS GLIAARARGR LGGRPKLLSS ADLDVARVLL
RDGTLTVSEV AARLGVIAST LYRYLLAARS TNPKQLNEAV PVP