Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0481 |
Symbol | |
ID | 5833518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 524921 |
End bp | 526312 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641366260 |
Product | integrase catalytic region |
Protein accession | YP_001637969 |
Protein GI | 163849926 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACAGG TTCTCCACGG CAGCGCCACG ACGACTGCGA CGGTCCGTCG GGCAATCCAA GCTCGTCAAG AGAGCGTGAG GGCCGCTGCC AAGCGCTACG GCATCAGCCC CACGACGGTG CAGAAGTGGC GCTCACGCCA GACCAGCACG GATGCACGGA TGGGGCCGAA GGAGCCCCGC TCCAGCGTGC TCAGCCTGGA GGACGAGGCG GTCATCGTCG CCTTCCGGCG GCACACCCTG CTGCCGCTCG ACGACTGCCT CTACGCGCTG CAGCCGAGCC TGCCGCATCT GACCCGCTCG TCACTCCACC GCTGCCTGCA GCGTCACGGC ATCAGCCGCC TGCCGGATGT GGACGGCGAC AAGCCTAAGC GGTCGCGCTT CAAGGCCTAC CCGATCGGCT ACTTTCACAT CGACATCGCA CAGGTCAGCA CGGAACAGGG CAAGCTGCAC CTGTTCGTGG CCATCGATCG CACGAGCAAG TTCGCATTCG TTCAACTGCA CGGACGAGCA ACTCAACGGA TCGCGGCAGC CTTTCTACAC GATCTGGTCG CCGCCGTGCC GTACACGATC CACACGGTGC TGACGGATAA TGGCATCCAG TTCACCGACA ACCATCCGGT GGACGAGGAG GCCGAGGCTA AGGCGGCAGC TTATTGGGCC GAACGCGACG AGCCACGCAT CTACCGCTGG CACTCGTTCG AGTGGGCCTG CGAGCAGACC AAGATCGAGC ATCGCCTGAC CAAGCCGCGC TGCCCGTGGA CGAATGGCCA AGTCGAGCGG ATGAACCGCA CCATCAAGGA CGCCACGGTC AAGCGCTACC ATTACGCCAG CCACGACGAG CTCCGGATGC ACCTGCAGCT GTTCGTGGAT GCCTACAACT ACGGCCGCCG ACTCAAGACC CTGCGCGGCC TCACACCTTA TGAGTTCATC TGCCAGACCT GGACGAAAGA GCCCGAACGC TTCAGGCTCG ATCCGTCACA CCACATGCCG GGACCGAACA TCTCTAGTCA GCTGATTGCG ACGTTCGACG ATCTGGATAG GCGAGGGATC GAACTGCGCT CTCTGACAGA AGTGATCGAC ACAACGACTT CGGGCGGGAA GCTTGTGTTC CACATCTTCG GCGCACTGGC CGAGTTCGAA CGATCGATCA TCCGCGAACT GACGTTGTCT GGCCTGATTG CAGCTCGGGC GAGAGGTCGA TTAGGGGGTC GCCCGAAGCT GCTGAGCTCA GCAGACCTCG ACGTCGCTCG GGTGCTGTTG CGGGATGGGA CGCTGACGGT CAGCGAGGTG GCAGCACGAC TTGGGGTGAT CGCCTCGACG CTATACCGCT ACCTCCTTGC CGCCCGATCG ACCAACCCAA AACAGCTTAA CGAAGCGGTA CCAGTGCCGT GA
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Protein sequence | MGQVLHGSAT TTATVRRAIQ ARQESVRAAA KRYGISPTTV QKWRSRQTST DARMGPKEPR SSVLSLEDEA VIVAFRRHTL LPLDDCLYAL QPSLPHLTRS SLHRCLQRHG ISRLPDVDGD KPKRSRFKAY PIGYFHIDIA QVSTEQGKLH LFVAIDRTSK FAFVQLHGRA TQRIAAAFLH DLVAAVPYTI HTVLTDNGIQ FTDNHPVDEE AEAKAAAYWA ERDEPRIYRW HSFEWACEQT KIEHRLTKPR CPWTNGQVER MNRTIKDATV KRYHYASHDE LRMHLQLFVD AYNYGRRLKT LRGLTPYEFI CQTWTKEPER FRLDPSHHMP GPNISSQLIA TFDDLDRRGI ELRSLTEVID TTTSGGKLVF HIFGALAEFE RSIIRELTLS GLIAARARGR LGGRPKLLSS ADLDVARVLL RDGTLTVSEV AARLGVIAST LYRYLLAARS TNPKQLNEAV PVP
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