Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bmul_6035 |
Symbol | |
ID | 5770827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia multivorans ATCC 17616 |
Kingdom | Bacteria |
Replicon accession | NC_010087 |
Strand | - |
Start bp | 776973 |
End bp | 778190 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641320319 |
Product | porin |
Protein accession | YP_001585985 |
Protein GI | 161523056 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00334523 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.102447 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAAGC AGGCATGGCG GACGGCGCTG ACGTCCGGCG TCGCGTTCGC GGTCGCTGCA CCGGCATTCG CGCAAAGCAG CGTCACGCTG TACGGGATCG TCGACAACGG CATCGGCTAC CAGAGCAGCG CGACGACGGT CGGCTCGACG TCCGGCGGCA AGTCGCTCGT CAAGATGAAT CAGGGCGTGT GGGCCGGCAG CCGGTTCGGC CTGAAGGGCA CGGAGGATCT CGGCGGCGGC ACGAAGGCGA TCTTCACGCT CGAATCCGGA TTCAATTCGG GCACCGGCGC CGCGCAGTAC ACCGACGCGA TGTTCGGCCG GCAGGCGTGG GTCGGGCTGA CCAACGCGAC GTACGGCACG CTGACCGCCG GGCGACAGTA CGCGTCGTAC TACCAGACGA TGGCGCCGTT CAGCCCGATT ACATGGATCA CCGGCTACTA CGGCGCGCAC CCGGGCGACG TCGACGGGCT CGACACGATC TATCGTGCGA ACAACACGAT CGAATATACG TCGCCGAAAT GGTACGGCCT GACGCTGAGC GGCTCGTACT CGCTCGGCGG CGTCGCGGGC AGCACGAACG CCGGCTCGAC GTGGGCAACC GGCATTCAGT ATGCGGCCGG CCCGCTCGGT GTCGGCGTCG CGTTCGAGCG CATCAACAAC TCGAATACCG CGGGCGGCAC GTGGGGCGCG AATTCGACGA CGTCGAACGG CGGCTCGCAG ATCGGCGTGT CGGCGGTCAC GAACGGCTAT CAGACGGCGA AGGCGCAGCA GCGCTTCGCG GTCGGCCTCA GCTACCGGTT CAGCGACGCG TGGGATGCAA CGGCGACGTA CACGAACACG CAGTACATTC CGGGTGCCGC ATCGAAGTTC TTCAATACGG CGATCTTCAA TACGGCGGGC GCGGTACTGC ACTGGAAGCC GTCGGCGGTG TGGGATTTCG GTGCGGGCTA TGCCTATACG CGCGCGACCG AATCGAACGG CATCACCGAT AGCGCGCAAT ATCATCAGTT CAACCTGTCG CAGTACTACT CGCTGTCGAA GCGCACCGGG CTGTATCTGC TCGAAGCGTA TCAGCATGCG AAGGGCAAGA CGCTCGGCAC GAACGGCGCC GGCAATATCG TCAATGCGAC CGCGACGCTC GGCGACGGGC TGAACACCGC GCCGTCGTCG ACCGGCAATC AGTTCGCGTT CGGTGCCGGG ATCATTCACC GGTTCTGA
|
Protein sequence | MKKQAWRTAL TSGVAFAVAA PAFAQSSVTL YGIVDNGIGY QSSATTVGST SGGKSLVKMN QGVWAGSRFG LKGTEDLGGG TKAIFTLESG FNSGTGAAQY TDAMFGRQAW VGLTNATYGT LTAGRQYASY YQTMAPFSPI TWITGYYGAH PGDVDGLDTI YRANNTIEYT SPKWYGLTLS GSYSLGGVAG STNAGSTWAT GIQYAAGPLG VGVAFERINN SNTAGGTWGA NSTTSNGGSQ IGVSAVTNGY QTAKAQQRFA VGLSYRFSDA WDATATYTNT QYIPGAASKF FNTAIFNTAG AVLHWKPSAV WDFGAGYAYT RATESNGITD SAQYHQFNLS QYYSLSKRTG LYLLEAYQHA KGKTLGTNGA GNIVNATATL GDGLNTAPSS TGNQFAFGAG IIHRF
|
| |