| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1549 |
|---|
| Symbol | |
|---|
| ID | 5773380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 1418527 |
|---|
| End bp | 1419741 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641317201 |
|---|
| Product | threonine synthase |
|---|
| Protein accession | YP_001582883 |
|---|
| Protein GI | 161529057 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0498] Threonine synthase |
|---|
| TIGRFAM ID | [TIGR00260] threonine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.738086 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACTAGAA CTTCGCTGCA ATGTAGGGAA TGTAAAAAGG AGTATGAAAC TGCTTTCAAA
TACATCTGTG ATGATTGTTT TGGACCTCTA GATGTGAAAT ATGATTTTCC AACAGTTACA
AAAGATACTT TTTCTAATCG TGAACACACA TACTGGAGAT ATTTTGAATT ACTGCCAATT
GAAAACAAAT CTAACATCGT GTCAATTGAT GCAGGACTAA CTCCTCTAAC AAAAGCTGAA
AATCTAGGCA AAGCACTTGA TCTTAACAAT CTCTATATCA AAAATGACTC TGTAAATCCT
ACATTTTCAT TTAAGGACAG ACCTGCTGGA GTTGCAATCT CAAAAGCAAA AGAATTTGGA
TTATCTGCAG TTGGCTGTGC ATCAACAGGT AATTTAGCAT CTGCAACTGC AGCTCATGCT
GCAAAAGGTG GATTCCCATG TCATGTATTT GCTCCAAGTA ATATTGAGAT GGCAAAGATT
GCTCAAGCAT TATCTTATGG CGCAAACTAT GTTGCAGTTG ATGGAACATA TGATGACGCA
AATAGAATTG CAGCTCAAAT TGGTGACTCT AGAGGAATTG GAATTGTAAA TATTAACATG
CGTTCACATT ATGTTGAAGG TTCAAAGACA TTAGCTTATG AAGTTGCAGA GCAATTAGAT
TGGAATGTTC CTGATCAACT TATAGTTCCA GTTGGAAGCG GTGCAATGTT AAATGCTATA
TGTAAAGGAT TTGAAGAACT ACAACAAGTT TCATTACTTG ATGATGTATC TAACATGCAT
ATGATTGCAG CACAACCTCA TGGTTGTGCT CCTGTTGTTG ATGCATTTAA GAAAAATTCT
AAAGATGTAA TTCCAGTTGA GAATCCTGAC ACTGTTGCAA AAAGTCTTGC AATAGGAGAT
CCTGGTGATG GGCGATATGT TCTAAAAAGA TTAGAACAAT ACAATGGATT TGCTGAAGAA
TGTAATAACA AAGAAATTCT TGATGCAATA CTTTTACTAG CAAAGACTGA AGGAATATTT
ACAGAACCTG CAGGTGGAGT ATCTGTTTCA GTATTACAGA AGATGGTAGA ACAAGGAAAG
ATTGACAAAA ATGATAAAGT TGTATGTTAT GTTACTGGAA ACGGACTCAA AGCAACTGAA
TCAATTATGG AAGTGTTAGA AAAACCAAAT GTACTAAAGG CAGACATTTC AGAAGTATCG
GCGGTAGTGA ACTAA
|
|---|
| Protein sequence | MTRTSLQCRE CKKEYETAFK YICDDCFGPL DVKYDFPTVT KDTFSNREHT YWRYFELLPI
ENKSNIVSID AGLTPLTKAE NLGKALDLNN LYIKNDSVNP TFSFKDRPAG VAISKAKEFG
LSAVGCASTG NLASATAAHA AKGGFPCHVF APSNIEMAKI AQALSYGANY VAVDGTYDDA
NRIAAQIGDS RGIGIVNINM RSHYVEGSKT LAYEVAEQLD WNVPDQLIVP VGSGAMLNAI
CKGFEELQQV SLLDDVSNMH MIAAQPHGCA PVVDAFKKNS KDVIPVENPD TVAKSLAIGD
PGDGRYVLKR LEQYNGFAEE CNNKEILDAI LLLAKTEGIF TEPAGGVSVS VLQKMVEQGK
IDKNDKVVCY VTGNGLKATE SIMEVLEKPN VLKADISEVS AVVN
|
|---|
| |