Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0979 |
Symbol | |
ID | 5773571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 856416 |
End bp | 857327 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641316618 |
Product | transcription factor TFIIB cyclin-related protein |
Protein accession | YP_001582313 |
Protein GI | 161528487 |
COG category | [K] Transcription |
COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.290745 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTACAG AACTTGTACA TCAAAAGAGT TGTAAAAAAA ACAAGATTGT AACTGATCTG AATACAGGAG AGATTGCATG CACGAATTGC GGTGCAGTAC TCTCTGAAAG AGTAGTTGAC AGTGGTCCAG AAAGTCTAGG GATGACTGGA GAAGAATATC AAACCAACAG TAGAGTTGGA AGAAAAATTT CATTAAAAAT GATAGACATG GGATTATCAA CCATTATTGA GGCTAAAGAC AAAGATGCAA CAGGAAAAGG GCTATCAAAT GAGAACAAGA GAATGTTTTA TCGCCTAAGA ATGTGGGATA GAAATAGTCG TTCTGCAAGT ACCGCCAAAT CATTTCAAAA GGCATTCACC ATGCTTGATG GAATCAGTGC TAAACTAGGA CTTCCAGAGC CAGTAATAGA ACAAACTGCA TATCTATTTA GAAAAATTGC TGCAAAAAAG ATTCTTGCAG GAAGATCTAC AGCAGGGATT CTTTGTGCAG CAATTTACAT CACATGCAGA ATGACAAATA CACCAAGAAC TTTACAAGAT GTGGCAAATG CTGGAAATGT AAATAAAAAA AACATTCAAA GAACATACAG ATTTCTTGCA AGAGAATTAG ACATTACACC AGAAATTTAT CATCCAACAG AATTTGTAAC ACGAATTGCA AAGGCAGTAG ACATCTCTGA GAAAACAGAA AGATTGGCAT TTAGAATTTT AGATCTTTCT GCAAGAAACG GAGTATTAGA AAGTAAAAAT CCAATGGCAA TGGCTGCTGC TGCAACATAT CTCGCATCAG TAAAAAACGA TGAAAGAATT TCTCAGTTAA AAATTTCCAA AGTCTCTGGC ATTAGTGCAG TTACAATCAG AGATAGAACA AAAGAAATTT TGAAAAAGAT AGGAGGTGAA ATTAATGGGT AG
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Protein sequence | MITELVHQKS CKKNKIVTDL NTGEIACTNC GAVLSERVVD SGPESLGMTG EEYQTNSRVG RKISLKMIDM GLSTIIEAKD KDATGKGLSN ENKRMFYRLR MWDRNSRSAS TAKSFQKAFT MLDGISAKLG LPEPVIEQTA YLFRKIAAKK ILAGRSTAGI LCAAIYITCR MTNTPRTLQD VANAGNVNKK NIQRTYRFLA RELDITPEIY HPTEFVTRIA KAVDISEKTE RLAFRILDLS ARNGVLESKN PMAMAAAATY LASVKNDERI SQLKISKVSG ISAVTIRDRT KEILKKIGGE ING
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