Gene Nmar_0498 details

Gene Information

• Locus tag: Nmar_0498
• ID: 5774753
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: +
• Start bp: 449045
• End bp: 449488
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 641316130
• Product: NifU family SUF system FeS assembly protein
• Protein accession: YP_001581832
• Protein GI: 161528006
• COG category: [C] Energy production and conversion
• COG ID: [COG0822] NifU homolog involved in Fe-S cluster formation
• TIGRFAM ID: [TIGR01994] SUF system FeS assembly protein, NifU family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 50
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGTAGTA ATGCAGACAT TTACCATGAA ATGATTGTGG ATTATTCACG AAATCCTGTA 
AATTATGGTG AGATAGAAGA TCATGATGTA ACATTTCATG ATGCAAATCC ATTATGTGGT 
GATAGTATTG ACATTGATAT GAAAATTGAT GACGACAAAG TTACTGATAT CAAATTCCAT 
GGTAAAGGAT GTGCAATTTG TATGGCATGC TCTTCAGTTT TAACTGAAAT CACTAAAGGC 
AAAAGTCTTG AAGATGTAAA AAACATCGAA AAAAATGATG TTCTAAGCGA ATTAGGGTTG 
GAACACTTGC AAGCAGTCAG AATCAAATGT GCTCTGCTTT CTCTAAAGGT ACTCAAATCT 
GCTCTGTACA CATATCTTGC AAAACATCTT GAAAGTTCAG AGGATGTAGA TAAATTAAAA 
GAAGAGGCAG CAAACCTGTA CTAG 

 

Protein sequence

MSSNADIYHE MIVDYSRNPV NYGEIEDHDV TFHDANPLCG DSIDIDMKID DDKVTDIKFH 
GKGCAICMAC SSVLTEITKG KSLEDVKNIE KNDVLSELGL EHLQAVRIKC ALLSLKVLKS 
ALYTYLAKHL ESSEDVDKLK EEAANLY