Gene Daci_5984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5984 
Symbol 
ID5751605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6673772 
End bp6674674 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content68% 
IMG OID641301116 
Productalpha/beta hydrolase fold 
Protein accessionYP_001566997 
Protein GI160901415 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0152397 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTGA CACCCGCAGG GCTTAGCATG GAGCATCGCC GGCACGGTGC CCGAGAGAGG 
CGGGCAGCCG TTTCCGGCAG GTTTGTGACC ACCTTCGCAG GAGATCCCGA CATGCCCATC
GCTTCCGTCA ACGGCCAGAA CCTGTACTAC GAGGACACGG GCGGGAGAGG CCCGGCCCTG
GTGTTTTCGC ACGGGCTGCT CATGGACCAC ACCATGTTCG CTCCCCAGGT CCAGGCACTG
CAGGGGCGCT TTCGCTGCAT CAGCTGGGAC GAGCGCGGCC ATGGCCAGAC GGCAGACCCC
GAGCAGTGCG CACCCTTCGA CTACTACGAC TCGGCCGACG ACCTGGCCGC CCTGCTCGAG
CATCTGGGCG TGGAGCGCGC GGTGCTGGTG GGCATGTCGC AGGGCGGCTA TCTGTCGCTG
CGCTGCGCGC TCATCCACCC CGAGATCGTG CGCGCGCTGG TGCTGATCGA CACCCAGGCC
ATGCTGGAAG ACCCCGAGCA GATGCCCCAC CACGAAGCCT TGCTGCGCGC CTGGATGGAG
CATGGCCTCA GCGACGACAT GGCGACCACG GTGGAGCGCA CCATCCTGGG CCAGGGCTGG
AGCGGCGCGG CCGCCTGGCG TGCCAAATGG AAGAAGGCCA CGCCCATCAA CCTGGGGCAG
AGCTTTCTGG CGCTGGCCCA GCGCGATGAC ATCAGCCCGC GCCTGCCCGA CATCCATGTG
CCGGCCCTGG TCATCCATGG AACGGACGAC ACAGCCATCG CGCCCAACCG TGCACGCGCC
ATGGCCAAGG CCTTGCCCAG GGCGCAGTGG GTGGAGGTGC CGGGTGCCGG CCATGCGGCC
AACCTCACGC ATCCGCAGCC CGTGAACCTG GCCATCGAGC GCTTCCTGGA GCAGCTCGAC
TGA
 
Protein sequence
MALTPAGLSM EHRRHGARER RAAVSGRFVT TFAGDPDMPI ASVNGQNLYY EDTGGRGPAL 
VFSHGLLMDH TMFAPQVQAL QGRFRCISWD ERGHGQTADP EQCAPFDYYD SADDLAALLE
HLGVERAVLV GMSQGGYLSL RCALIHPEIV RALVLIDTQA MLEDPEQMPH HEALLRAWME
HGLSDDMATT VERTILGQGW SGAAAWRAKW KKATPINLGQ SFLALAQRDD ISPRLPDIHV
PALVIHGTDD TAIAPNRARA MAKALPRAQW VEVPGAGHAA NLTHPQPVNL AIERFLEQLD