Gene Daci_5841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5841 
Symbol 
ID5751462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6497213 
End bp6497638 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content64% 
IMG OID641300973 
ProductPilT domain-containing protein 
Protein accessionYP_001566854 
Protein GI160901272 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTTG TCGATACCAA CGTCATTTCG GAACTCTGGA GGCTTGCGCC CGACTCCAGA 
GTGCTTGCCT GGATGGACGC CCAGGCCATT GAAACGCTGC ATCTGTCTGC CGTCACCGTG
GCAGAACTGC GCTACGGCAT TGCAGCGATG CCTGAGGGAA GGCGCCGCAC CATCTACCAG
GAGCGACTGG AGCATGAGGT TCTGCCGGCC TTCGCCGGCC GTGTCCTGGC CTTTGACCTG
GACGCGGCAA AGGCCTATGC CGATCTGATG GCGAGCGCGA AGACGCAGGG CAGGGCCATC
GCCAAGGCCG ATGGCTATAT AGCGGCCACT GCCATGGCGC ATGGGCTGGT GGTGGCAACG
CGCGACACCC GTCCGTTCGA GGCCGGTGGG CTGCAGACCA TCAATCCCTG GACGGCAGCG
CCCTAG
 
Protein sequence
MIVVDTNVIS ELWRLAPDSR VLAWMDAQAI ETLHLSAVTV AELRYGIAAM PEGRRRTIYQ 
ERLEHEVLPA FAGRVLAFDL DAAKAYADLM ASAKTQGRAI AKADGYIAAT AMAHGLVVAT
RDTRPFEAGG LQTINPWTAA P