Gene Daci_5605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5605 
Symbol 
ID5751225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6233196 
End bp6234170 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content66% 
IMG OID641300738 
Producthypothetical protein 
Protein accessionYP_001566619 
Protein GI160901037 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.748883 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCCC CGCCTTCATG GGGCTTTTTA CGTGAGGTGT CCCTTGCTGG CACCCGGGTC 
CTGGCCTCTT CGCTCTGGCG GACAGCCTTA GCTCACTACA CTTGGACCCT GGTAAGCGTT
TCACTTCACC CTCCGACGCA CAGCGCCAAG CCCATGCCCT CCACCACCCA GCTACTGGTC
ATAGACCCCC AGAACGACTT CTGCGATCTG CCTGAGGACT GGTGTCCTGG CGGGCAACGT
CCCAGCCTTC CCGTGACGGG CGCCCATGCC GACATGCAGC GGCTTGCCGG TTGGATACGG
CGCGAGGGGG CGAGAATTGA CGAGATCATG GTGACGCTGG ACTCGCACCA GCGCTATGAC
ATTGCCCACC CCGCCTTCTG GCAGCAGGGC GATGGCAGCG AGGTAGTGCC GTTCACCCCT
ATCACGGCGG CGCAGGTGCG GGCGGGGGTG TTCCGGCCGC GCAACGCCGA GGCGCTGCAG
CGCAGCCTGG ACTATCTGGA TGCACTCGAA GCCAACAGCC GCTACACGCT GATGGTCTGG
CCCGTGCACT GCGAGGTGGG CAGCTGGGGC CACGGTATCC ATGCCGATGT GCTGGCGGCC
TGCGGCGACT GGCAGCAGCA GCGCCAGCGC GCCGTGTACA ACGTTTTCAA GGGGCTCAAT
CCCTGGACCG AGCACTACAG CGCGCTGCTG GCCGAGGTCC CCGACCCGGC CGATCCGGCG
ACCTTGCTGA ATACGGCCTT GCTGGAGCGG CTGGGCCAGG CAGACATACT GGTGGTCGCG
GGCGAGGCGA GCAGTCACTG CGTGCGCTCC ACGGTCGAGC ATCTGGTCGA GCACCTTCCC
CATCCTGAGC GCATCGTGCT GATGCATGAC GCCATGAGCC CGGTGCCGGG CTTCGAGTCC
GCGCACCATG ATTTTTTAGC AGCCATGCAG GCCCGCGGAT TGCGGCTGGC CTCCAGCCAA
GAACTCCACC TGTAG
 
Protein sequence
MQAPPSWGFL REVSLAGTRV LASSLWRTAL AHYTWTLVSV SLHPPTHSAK PMPSTTQLLV 
IDPQNDFCDL PEDWCPGGQR PSLPVTGAHA DMQRLAGWIR REGARIDEIM VTLDSHQRYD
IAHPAFWQQG DGSEVVPFTP ITAAQVRAGV FRPRNAEALQ RSLDYLDALE ANSRYTLMVW
PVHCEVGSWG HGIHADVLAA CGDWQQQRQR AVYNVFKGLN PWTEHYSALL AEVPDPADPA
TLLNTALLER LGQADILVVA GEASSHCVRS TVEHLVEHLP HPERIVLMHD AMSPVPGFES
AHHDFLAAMQ ARGLRLASSQ ELHL