Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5134 |
Symbol | |
ID | 5750745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 5689422 |
End bp | 5690450 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641300258 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001566148 |
Protein GI | 160900566 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.178908 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.868057 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACACA TGGCACGAAA CCTGCAAGAT CGGCCCATGC ATTCCCAGCC CCACCCCGAT GCCGGTCCCG CCATGAAGCT GCACCAGATG CGCTACCTCG TCGCCGTGGC CGGCTGTGGC AGCGTGCGCG CCGCGTCACG CGCGCTGGGC ATCACGCAGT CGGCCATCAC CCAGGCCCTG CGCGAGCTGG AGGAAGGCCA CCGCCTTGCG CTGTTCGAGC GCCAGAGCAG CGGCATCGTC CTCACGCCGG CCGGGCGCAC GCTGCTGCGC CACGCCCAGC TGATCACCGG GCAGATGGCC CAGGCCGAGG ATGAAATGGC CCGCCTGCGC GACACCTGCG CCGTGGCGCG CCTGTCCGTA GGCGTGACGC CCTGGGTGGG CCAGAGCCTG CTGCCCCATG TGCTGCGCGC CTTCCGCGCC GAACTGCCCC AGGTACGGCT GGAACTGTTC GAGGGCCTGT CGGCCGTGGC CCATCCGCGC CTGCGCGAAG GCACGCTGGA CCTGCTGATT GGCCGCGTGC CTTCGGGCCC CTCGGGCGGC GACCTGCATG GCACACCGCT GTTCCGCTAT GACGCCACCG TCGTGGCCCG CACCGGCCAT CCGCTGGCAG GCGCCCGTTC GCTGGCCGAG CTGATGGACT GCGACTGGCT GCTCAACTAC ACGCCGCCTG AAGAAGACGA CCTGGTGCGG CGCCTGTTCC TGCGCCACGG CCTGCCCGTG CCCGTGGGCC ACATCCACCT GGTGCATTCG GCATCGCTGC TGCTGCACCT GATCGTGCAC AGCGACATGC TCTCGTTGTG CCCCTGGCCG CTGATCGAGT CGGGCGTGCC CCAGGGCACC CTGGTGCCGC TGTCCCTGCG CGAGCAGTTC GAGCCCCACA CGGTGGGCGT GGTCCAGCGC GGCCACGGCC CCCTGCCCTG GGTGGCCGAG CGCTTCGTGC ACCACCTCAT GGAGCAGGTC CACGCCTGCC GCCACAGCCC GGACCCGGTG CTGCAGCGCG TGTTCCGCTC CATTGACGTG CTGGCTTGA
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Protein sequence | MAHMARNLQD RPMHSQPHPD AGPAMKLHQM RYLVAVAGCG SVRAASRALG ITQSAITQAL RELEEGHRLA LFERQSSGIV LTPAGRTLLR HAQLITGQMA QAEDEMARLR DTCAVARLSV GVTPWVGQSL LPHVLRAFRA ELPQVRLELF EGLSAVAHPR LREGTLDLLI GRVPSGPSGG DLHGTPLFRY DATVVARTGH PLAGARSLAE LMDCDWLLNY TPPEEDDLVR RLFLRHGLPV PVGHIHLVHS ASLLLHLIVH SDMLSLCPWP LIESGVPQGT LVPLSLREQF EPHTVGVVQR GHGPLPWVAE RFVHHLMEQV HACRHSPDPV LQRVFRSIDV LA
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