| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4522 |
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| Symbol | |
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| ID | 5750110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4971556 |
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| End bp | 4972635 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641299623 |
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| Product | porin |
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| Protein accession | YP_001565536 |
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| Protein GI | 160899954 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.243199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACCT TGCAACGAGG AGGCTGGGCC GTGGGCGCCG CAGCCCTGGC CCTGGCAAGC
CAGGTGCATG CGCAGGCACA GGCACAGGCA CAAGCGCAGA CATCGGCCCC GCCCGCGATC
CCCAGCAGCA GCGTGACGCT GTACGGCGTC GTGGACATGG CGGTGGAGTC GGCGCGCACG
GGCAATGGCG GCCTGCAGCG GCTGGAAAGC GGCGTGATCG CCGGGTCGCG CTGGGGCCTG
CGCGGCACGG AGGACCTGGG CGGCGGCCAG CGCGCGCTCT ATGTGGTGGA GGCCGGATTC
AACGGCGACA CGGGGGCCAG CGGCCAGGGC GGCCTCGCCT TTGGTCGCCA GGTCTTCGTG
GGCCTGGGCG GCGGCTGGGG CCAGCTCACG GCCGGGCGCC ACTACACCAC GCTGCACACC
TCGCTGGCCA GCTATGCGCT CACCGGCCTG ATCTGGGGCA ACGCGGCCAA CTATTTCCGC
GACGGCACGG TGCTGCGCGC CAGCAATTCG CTGCGCTACC AGTCGCCGAA CATGGGCGGC
TTCACGGTGC GCGGCATGTA TTCGTTCGGC GAGGCGGCGG GCTCCAGCGT GGCCAGCCTG
TACGGAGGCT CCGTGGACTA TGCGGCCGGG CCCTGGGCAC TGGGTGCATC GTGGATGCAG
CGGCGCACCA CGGCCGTGAA TACCGACCGC TATGCGCTGC TGGGCGCAGC CTATGACTTC
GGCGTGGCGC GTGCCGCGCT GCTGCTGTCC ACGCGGCACG ACGACCTGCC TGCCGCCACC
AGCGGCCAGG GCCGTTTCTA CGAGGCCAGC GTGACCGTGC CCATGGGCAT GGCGGGGCAG
TGGCTGCTGT CCTATGGCGC CTACCACGGA CAGGCTCGCG CCCAGAGCGA TGCGCGTGCG
CTGAGCGTGC GCTACGACCA CTCGCTGTCC AAGCGCACCA AGCTCTATGC GGGCGTGGGC
CGCATCCACA ACGAGGCGGG CGCCGCCTTC ACCATCAACA CCGCCAGCAA TGCGGGGCCG
GTGGTCCAGG CAGGCAGCCG GCCCAGCTCG GTGGTGCTTG GCATATCGCA CGCCTTCTGA
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| Protein sequence | MNTLQRGGWA VGAAALALAS QVHAQAQAQA QAQTSAPPAI PSSSVTLYGV VDMAVESART
GNGGLQRLES GVIAGSRWGL RGTEDLGGGQ RALYVVEAGF NGDTGASGQG GLAFGRQVFV
GLGGGWGQLT AGRHYTTLHT SLASYALTGL IWGNAANYFR DGTVLRASNS LRYQSPNMGG
FTVRGMYSFG EAAGSSVASL YGGSVDYAAG PWALGASWMQ RRTTAVNTDR YALLGAAYDF
GVARAALLLS TRHDDLPAAT SGQGRFYEAS VTVPMGMAGQ WLLSYGAYHG QARAQSDARA
LSVRYDHSLS KRTKLYAGVG RIHNEAGAAF TINTASNAGP VVQAGSRPSS VVLGISHAF
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