Gene Daci_4280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4280 
Symbol 
ID5749868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4683893 
End bp4684894 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content70% 
IMG OID641299383 
Producthypothetical protein 
Protein accessionYP_001565296 
Protein GI160899714 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.711918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATTC CCTCGCTTTC GCGTTGCCTC AACGCACGCC TTCTTGCCGT CCTGGTCGGC 
GTTGCCGCCA TCGTGCCCAT GGGCGCTGCC CAGGCCCAGG ACGCCTATCC CCGCAAGCCC
ATCCGCCTGG TCGTGCCGTT TCCGCCCGGT GGCGGCACGG ACATGATCGC GCGCACCGTG
GCCCAGCGGC TGGCGGACCA CAACAAGTGG ACCGTGGTGG TGGACAACCG GCCCGGCGCC
GGCGGCAACC TGGGCGTGGA TGCCGTGGCC AAGGCCGCGC CGGACGGCCA TACCCTGGTC
ATGGGCCAGA CCAGCAACCT GGCCATCAAT CCCTCGCTGT ACGCCAGGCT GCCCTATGAC
CCGCTGAAGG ATCTGGTGCC CGTGGCGCTG GTGGCTTCCG CGCCCATCGT CATGGCCGCG
CCGGCCAACT CGCCCTACAA GACCTTTGCC GACCTGGTCA AGGCCGCCAA GGCCAAGCCC
GACGGCCTCA CGCTGGGCTA CCCGGGCAAC GGCACGGTGG CGCACCTGGC CGGCGAACTG
GCCGAGAACG CGGCCGGCAT CAAGCTGCGC CATGTGCCCT ACAAGGGCGC AGCCCAGGCC
ATGACCGACC TGGTGGGCGG GCAGATCGAT TTCTACATGT CCGCCGTGCC CACGCTGCTG
GGCCAGGTGC GCAACGGCAA GCTGCGCGCG GTGATGGTCA CCTCGCTCAA GCGCTCCGCC
CAGCTGCCGC AGACGCCCAC GCTGGCCGAG TCCGGCTACC AGGACTTCGA GGCCGTCACC
TGGTTCGGGG TGCTGGCGCC GGCGGGCACG CCGCAGGCCA TCGTGCAGCA GTTGAACAAG
GCCATCAACG ACGCGCTGCT GGTGCCCGAG GTGGCCGAGA AGCTGCGCTC CGAAGGCGGC
GAGGTGCTGG GCGGCTCGTC CGAGAAGTTC GCCGCGCTGC TGCGCGCCGA GGTGCCGCGC
TGGGCACGCA TCGTCAAGGA CTCGGGCGCC AGCCTGGACT GA
 
Protein sequence
MPIPSLSRCL NARLLAVLVG VAAIVPMGAA QAQDAYPRKP IRLVVPFPPG GGTDMIARTV 
AQRLADHNKW TVVVDNRPGA GGNLGVDAVA KAAPDGHTLV MGQTSNLAIN PSLYARLPYD
PLKDLVPVAL VASAPIVMAA PANSPYKTFA DLVKAAKAKP DGLTLGYPGN GTVAHLAGEL
AENAAGIKLR HVPYKGAAQA MTDLVGGQID FYMSAVPTLL GQVRNGKLRA VMVTSLKRSA
QLPQTPTLAE SGYQDFEAVT WFGVLAPAGT PQAIVQQLNK AINDALLVPE VAEKLRSEGG
EVLGGSSEKF AALLRAEVPR WARIVKDSGA SLD