| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3955 |
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| Symbol | |
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| ID | 5749538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4354251 |
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| End bp | 4357478 |
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| Gene Length | 3228 bp |
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| Protein Length | 1075 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641299053 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001564971 |
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| Protein GI | 160899389 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium)
[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.542775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.203686 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGTTCA CGCGCGTCAG CCTGGCCAAC CCTGTGTTCG CCACCATGCT CATGCTGGCC
CTCATGGTGC TGGGTGTGTT TTCCTACCAG CGACTCAAGG TGGACCAGTT CCCGAATGTG
GACTTCCCCG TGGTCGTGGT CACGGTGGAC TATCCGGGCG CCTCGCCCGA GATCGTGGAG
TCCGAGGTCA CCAAGAAGAT CGAGGAAGGC GTCAACTCCA TTGCCGGCAT CAACGCACTG
ACCTCGCGCA GCTATGAGAG CACCAGCGTC GTCATCATCG AATTCCAATT GCATGTCGAT
GGCCGCCGCG CTGCCGAAGA CGTGCGCGAG AAGGTGGCCT CGGTGCGCCC CACCCTGCGC
GACGAGGTCA AGGAGCCGCG CGTGCTGCGC TTCGATCCGG CCAGCTCGCC CATCTGGTCC
GTGGCCGTGC TGCCCCAGGC CGATGCCGGC GCCAAGGCGC CCGATGCCGT CGCGCTGACC
AGCTGGGCCG ACCAGGTCCT CAAGAAACGG CTGGAGAATG TGCGCGGCGT GGGCGCCGTC
AACCTGGTGG GCGCCACGCC GCGCGAGATC AACATCTACC TGCAGCCCGA GGCGCTGGAA
GCCTATGCCA TCACGCCCGA CCAGATCGTG AACGCCGTGC GCAGCGAGAA CCAGGACCTG
CCGCTGGGCG CCATCCGCTC GCGCGAGCAG GAGCGCGTGG TGCAGATCGA CGCACGCATG
AAGCGCCCGC AGGACTTCGA GCGCATCATC GTCGCCCAGC GCGGCGGCGC TCCCGTGCGG
CTGGGCCAGC TGGCGCGCGT GCAGGACGGC GCGGGCGAAC TGGAAACCGT GGCCCTGTAC
AACAGCAGCC GCACCCTGCT GCTGTCCGTG CAAAAGGCCC AGGACGAGAA CACCATCGAA
GTCGTGGACG GCCTGAACGC CACGCTGCGC GAGATCGCCG CCGAAGTGCC GGCCGGCGTG
CGGCTGGAGC CGATTGCCGA CAGCGCCCGC CCCATCCGCG TGGCCGTCAA CAACGTGCGC
CAGACGCTGA TCGAGGGCGC GGCACTGACG GTGCTCATCG TCTTCCTGTT CCTGAACTCC
TGGCGCTCCA CGGTGATCAC GGGGCTGACG CTGCCGATTG CGCTGATCGG CACCTTTTTG
TTCATGTATT GGTTCGGCTT CTCGATCAAC ATGATCACGC TGATGGCGCT GTCGCTGTGC
GTGGGCCTGC TGATCGACGA CGCCATCGTG GTGCGCGAGA ACATCGTGCG CCATGTGCAG
ATGGGCAAGG ACGCGCATGC CGCCGCGCTG GACGGCACGC AGGAGATCGG CCTGGCCGTG
CTGGCCACCA CGCTGTCCAT CGTGGCGGTG TTCCTGCCCA TCGGCTTCAT GGGCGGCATC
ATCGGCAAGT TCTTCCACGA ATTCGGCATC ACGATCGTGG CGGCCGTGAT GATCTCCATG
TTCGTGAGCT TCACGCTGGA CCCCATGCTC TCCAGCGTCT GGCATGACCC GACCATCCAC
GCCCATGGCG AGCAGCGCGG CCGCAGCCTC TACGACCGCA CGCTGGGCCG GGTCACGGCC
TGGTTCGAGC GCGCCACCGA CTCGCTGTCC CACTTCTACC AGGACGTGCT GGGCTGGGCG
CTGCGCCACA AGATCACCAC GCTGGCGGCG GCGCTGGCCA TCTTCGTGGC CAGCATCTTC
CTGGTGCCGC TGCTGGGCAC GGAATTCGTG CCCAAGGCCG ACTTCTCGGA AACCACGGTG
AGCTTCAACA CGCCCGTGGG CTCGTCCATC GAGGCCACGG AGGCCAAGGC CCGCCAGGTC
GATGCCATCA TCCGCGCCCT GCCCGAGGTC CGCTACACGC TGGCCACCAT CAACACCGGC
ACGGCCCAGG GCAAGATATA CGCCAGCATC TACATCCGCC TGCTGGACCG CCACCTGCGC
CAGCGCAGCG GCGATGAACT GTCGGGCGTG CTGCGCGAGC AGCTGCAAAG CGTGCCCGGC
ATCACCGTCA CCCATGTGGG CCAGCGCGAG CCCGTGGGCG GGCAAAAACA GGTCGAATTC
TCACTGCAGG GCCCGGACCT GGGCGAGCTG GAGCGCCTGA ACCGCGTGGT GATGGAACGC
CTGCGCGGCA TTCCCGGACT GGTGGACCTG GACAGCAACC TCAAGCCCGA CAAGCCCGTG
ATCGACATCA CCGTGCGGCG CGATGCGGCC GCCGACCTGG GCCTGTCGGT AGGCTCCATG
GCAACGGCTC TGCGCACCTG GGTGGCCGGC CAGACCGTGG GCAACTGGCG CGCCAGCGAC
GACCAGACCT ATGACGTCAA GGTGCGCCTG GCGCCCGAGT CGCGCAGCAC GCCCCAGGAC
CTGGAGCGGC TGCCCTTCGC CCTGCCCTCC ACCTCGGGCG ACGGCGGCAT GCGCATCGTG
CGGCTGAACC AGGTGGCCAC CGTCACGCCC AGCACCGGCC CCAGCCAGAT CAACCGCCGC
GACATGACGC GCGAGGTCGC CTTCAGCGGC AACGTCTACC TGCGCTCCAG CGGCGAGGTC
TCGGCCGACA TCCTCAATGC CTTGGCCGAC ATCGCCCTGC CACCCGGCTA CCGCACGCAG
TTCAGCGGCG CCACCAAGAG CATGAACGAA TCGTTCGGCT ATGCGGTGTC CGCCCTGGCG
CTGGCCATCA TCTTCATCTA CATGATCCTG GCCAGCCAGT TCAAGAGCTT CCTGCAGCCG
CTGGCGTTGA TGACCTCGCT GCCGCTGACG CTGATCGGCG TGGTGCTGGC GCTGATGATG
TTCGGCTCGG CCCTGTCCAT GTTCTCCATC ATCGGCGTGG TCATGCTCAT GGGACTGGTC
ACCAAGAACG CCATCTTGCT GGTGGACTTC GCCATCCGCG CGCGCGGGCC GCACAGCGAC
CCGGACACCG GCCAGATCCG CGACGGCCTG CCGCGCGAGC AGGCCCTGCT GCTGGCAGCA
CGCGTGCGGC TGCGCCCCAT TCTGATGACC ACGCTGGCCA TGATCTTCGG CATGGTGCCG
CTGGCCTTCG CGCTCAGCGA AGGCTCCGAG CAGCGCGCGC CCATGGGCCA GTCGGTGATC
GGCGGCGTGG TCACCTCGTC GCTGCTGACC CTGGTGGTCG TGCCCGTGGT CTATTGCTAC
CTTGACGACT TCTCCCAGTG GCTGCGGCGC CTGTGGAACG GCAACCGGCA CGACGCGGCA
CCCGGCCAAG GCGCCGCCAG CGCCCCCACC CCGCCGCGAG ACTCGTAG
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| Protein sequence | MWFTRVSLAN PVFATMLMLA LMVLGVFSYQ RLKVDQFPNV DFPVVVVTVD YPGASPEIVE
SEVTKKIEEG VNSIAGINAL TSRSYESTSV VIIEFQLHVD GRRAAEDVRE KVASVRPTLR
DEVKEPRVLR FDPASSPIWS VAVLPQADAG AKAPDAVALT SWADQVLKKR LENVRGVGAV
NLVGATPREI NIYLQPEALE AYAITPDQIV NAVRSENQDL PLGAIRSREQ ERVVQIDARM
KRPQDFERII VAQRGGAPVR LGQLARVQDG AGELETVALY NSSRTLLLSV QKAQDENTIE
VVDGLNATLR EIAAEVPAGV RLEPIADSAR PIRVAVNNVR QTLIEGAALT VLIVFLFLNS
WRSTVITGLT LPIALIGTFL FMYWFGFSIN MITLMALSLC VGLLIDDAIV VRENIVRHVQ
MGKDAHAAAL DGTQEIGLAV LATTLSIVAV FLPIGFMGGI IGKFFHEFGI TIVAAVMISM
FVSFTLDPML SSVWHDPTIH AHGEQRGRSL YDRTLGRVTA WFERATDSLS HFYQDVLGWA
LRHKITTLAA ALAIFVASIF LVPLLGTEFV PKADFSETTV SFNTPVGSSI EATEAKARQV
DAIIRALPEV RYTLATINTG TAQGKIYASI YIRLLDRHLR QRSGDELSGV LREQLQSVPG
ITVTHVGQRE PVGGQKQVEF SLQGPDLGEL ERLNRVVMER LRGIPGLVDL DSNLKPDKPV
IDITVRRDAA ADLGLSVGSM ATALRTWVAG QTVGNWRASD DQTYDVKVRL APESRSTPQD
LERLPFALPS TSGDGGMRIV RLNQVATVTP STGPSQINRR DMTREVAFSG NVYLRSSGEV
SADILNALAD IALPPGYRTQ FSGATKSMNE SFGYAVSALA LAIIFIYMIL ASQFKSFLQP
LALMTSLPLT LIGVVLALMM FGSALSMFSI IGVVMLMGLV TKNAILLVDF AIRARGPHSD
PDTGQIRDGL PREQALLLAA RVRLRPILMT TLAMIFGMVP LAFALSEGSE QRAPMGQSVI
GGVVTSSLLT LVVVPVVYCY LDDFSQWLRR LWNGNRHDAA PGQGAASAPT PPRDS
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