Gene Daci_3869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3869 
Symbol 
ID5749452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4266195 
End bp4267511 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content60% 
IMG OID641298967 
Producthypothetical protein 
Protein accessionYP_001564885 
Protein GI160899303 
COG category[S] Function unknown 
COG ID[COG5351] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0106797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCGCC CTTCCCACGC AATGCCCAGT CCGGTGGAGT CCGCCCCCTT GCCGGAGGTG 
GTCAACCACA CGCCCTGGCC CAGCCAGTAC TTCCAGCATG TGGACCCACA TGGCGAGATC
TTTCACGTCA TGGTCAGCCG CATCTCCTAC ACGCTGCGCG CGGTACAGAA AAATGGCGAT
CTCATAGAGC CCACTGTCCT GCCGCCCGAG CAACAGACAC CGCTTTGCAC CGCAGACGAG
TTCTACGCAA ACGTGAACAT CAGCAGCGTG CTGCAGGAAA GCGATCTTGC TCCTTACAAG
CCAAAGTGCG ATGTCATCCT CACCAATGCC TTTGCATATA CGCCAGACGG CAAGCCTCAT
GAGCGGTGGC CGGCCGGCTT CAGGTTTGCA GACAGCATCA TCAAAACGCT TCAGGTCACC
GGACCGCGGC AATTCGAGCG CTCTCTGACC AGCCTCGGAG CGCTGCGTCC CGGCGCCCCG
AAACCGGTCA CTCAGGTGCC GCTGTGCTAT GAGCTGGCCT TCGGGGGCCC CAATGTCATT
CGCCAGGAGC AACTTCTGCA GGAGTTTCTG GATGACAGGG ACGACGTCAG GATCACAAAG
TCCCAACGCG AGATCGCCCA ACAGGCGCAT CACGCGCTCC CCGCCTTCTA CACGCCCAAT
CCGATTGGTT GCGGCAGGCT TCCCGAGGCG GTCCACGACG CCGACAAAGC CATTGCGAAA
CTGGAAACCC ACACACAGCG GCAGCCCCAG TCCGCGCAGC ACTACGCAGC GCCGCAGATT
GAAGCCTTGA ACCAGCCTTA TGACGGACAG CAGGACTATC CGGTCGTAGG CGTGGGCGCC
ATTGGACGCT GGTGGAGTCC TCGGGTTTCC CTAGCCGGGA CGCATGACGA CGCATGGAAG
CAATCCCAGT GGCCCAAAAG TCCTTTGGAT CATGACTACC GCTACTGGAA CTGTGCGCCG
GAAGACCAGC AGATCGACTA CCCGCAGGGT GGCGAAGAGG TCATGCTCCT GAACCTCATT
CCAGCCGACA AATACCAGGG CATTTTCCGC TTCAAGCTAC CCACGCAGGA GCTGCAACTG
CTGGTACGCC TGAATGTGGG CGTGGTGATG TTTGCGCCCA TGAACATAGA CACGGTGATC
CTGGATTTGG CGACCGGCAC TGTGACTACC GTCAGGCGGG CAATCATCAG CGCCAAGACA
GATGTCAGGC AGCTGGAATT GGGCACCTGG CCCAAAGGCA CAGGCATGGA ACTGGATGCC
GAAATGCAGC GCGCAGCCAG CGAACGCGCG AAACCTCAGG AGGCACGCCG TGGCTGA
 
Protein sequence
MERPSHAMPS PVESAPLPEV VNHTPWPSQY FQHVDPHGEI FHVMVSRISY TLRAVQKNGD 
LIEPTVLPPE QQTPLCTADE FYANVNISSV LQESDLAPYK PKCDVILTNA FAYTPDGKPH
ERWPAGFRFA DSIIKTLQVT GPRQFERSLT SLGALRPGAP KPVTQVPLCY ELAFGGPNVI
RQEQLLQEFL DDRDDVRITK SQREIAQQAH HALPAFYTPN PIGCGRLPEA VHDADKAIAK
LETHTQRQPQ SAQHYAAPQI EALNQPYDGQ QDYPVVGVGA IGRWWSPRVS LAGTHDDAWK
QSQWPKSPLD HDYRYWNCAP EDQQIDYPQG GEEVMLLNLI PADKYQGIFR FKLPTQELQL
LVRLNVGVVM FAPMNIDTVI LDLATGTVTT VRRAIISAKT DVRQLELGTW PKGTGMELDA
EMQRAASERA KPQEARRG