| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3848 |
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| Symbol | |
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| ID | 5749431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4243450 |
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| End bp | 4244487 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641298946 |
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| Product | ImpA family type VI secretion-associated protein |
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| Protein accession | YP_001564864 |
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| Protein GI | 160899282 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03363] type VI secretion-associated protein, ImpA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0120503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAATA TCCAGGACCT GCTGACCGAG ACCGCCGCCG AGCCGCCCTG CGGCCCGGAC
CTTACCTATG ACAACGATTT CCAGGCCATG GAAAGCGCTG CCCAGGGCAA GGTAGAACAG
CAGTTCGGCG ACACCGTCAT CCCCGCCGAG CCACCGGATT GGCGCGACGT GGAGCGCCAG
GCCTCGGCCC TGATGCAGCG CACCAAGGAC CTGCGCGTGG CCGTGCTACT GTGCCGTGCC
TGGACCATCC TGCACGGCCT GCCCGGCACG CTGCAGGGCC TGCAGCTGTG CGGCGCCCTG
CTGGAGCGCC ACTGGGAGCA TGTCCACCCC CTGCCCGAGG ATGGCGACGA CTACTTCATG
CGCATGAACG CCCTGGGCAC CCTGTCCGAT GTGACAGGCT TTGTGCGTGA CCTGCGCAAC
GCCGACTTCC TGCGCGGCGC GCTGGGCCAG ATCAGCGTGC GCGACGCCGA ACTGATGGCC
AAGGGCAACG TGCCCGAGGA CCTGCCGCAC CTGACCACCG ACGAATTGCG CATGGCCTCG
GCACGCGCGC ATGCCGAGGG CCACGAAACC CTGCTGGCCG TCACCCCTGC GCTGCAGGAA
CTCGACCGGA TCCGCGCCTG CTGCGAACAG CACCTGCCCA GCCACCAGCA GCCCGAGCTC
GACGGCCTGC GCCAGCTGCT GCTGGCCCTC AAGCAATGGC AGCCCCAGTC CACAGGCGAT
GCCGACACGG ACGCTGAAAC CGATCCGGCC GCACGAACCG GTGCAGAGGG CGACACAGAG
GGCGGCACGG TGGCCCACCC CGCGTCAGGT TCGGCACCCG CCCCGGCGCG CAACCGCGAA
CAGGCGATTG CCCAGTTGCT GGAAATCGCC GCCTTCGTGG AGCGCACCGA GCCCTCCAAC
CCCGCCCCCC TGCTCATCCG CCGCGCCGCC CGCTTCATGC GCATGGGCTT CATGGACATC
CTGCGCGAAC TGTCCCCCGA CAGCCTGGCC CAGGTGGAAG TGATCACGGG CGCCCACCTG
CAGGAGCAGC AGACATGA
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| Protein sequence | MANIQDLLTE TAAEPPCGPD LTYDNDFQAM ESAAQGKVEQ QFGDTVIPAE PPDWRDVERQ
ASALMQRTKD LRVAVLLCRA WTILHGLPGT LQGLQLCGAL LERHWEHVHP LPEDGDDYFM
RMNALGTLSD VTGFVRDLRN ADFLRGALGQ ISVRDAELMA KGNVPEDLPH LTTDELRMAS
ARAHAEGHET LLAVTPALQE LDRIRACCEQ HLPSHQQPEL DGLRQLLLAL KQWQPQSTGD
ADTDAETDPA ARTGAEGDTE GGTVAHPASG SAPAPARNRE QAIAQLLEIA AFVERTEPSN
PAPLLIRRAA RFMRMGFMDI LRELSPDSLA QVEVITGAHL QEQQT
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