| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3838 |
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| Symbol | |
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| ID | 5749421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4229490 |
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| End bp | 4231553 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641298936 |
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| Product | serine/threonine protein kinase |
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| Protein accession | YP_001564854 |
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| Protein GI | 160899272 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0145005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0732464 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAGCG AAGCAGCATG TTCGACCAAC TGCCTTCCGG CAGGTGTCCA GATTGGCGAA
TACCGCGTGC TCGATGTCAT CGGCGAAGGC GGTTTCGGCA TCGTCTACAA GGCCCGTGAC
CTCTCGCTGG ACCGCGAGGT CGCGATCAAG GAGTACATGC CTTCGGCCCT GGCCGGGCGG
CAAAGCTCCC ATCAGGTGCA TGTGCGCTCG CAGCACCGGG GCGCGTTCGA CGCCGGGCTG
CGCAGCTTCA TCAACGAGGC CCGCCTGCTG GCGCGCTTCT CGCACCCCAC CCTGGTGCAT
GTCTACCGAT TCTTCGAAGC CGGCGGCACG GCCTACATGG TGATGCGCCA CTACGAGGGC
CAGACGCTGG GCCGCGTGCT GCAGGCATCG TCGGGCCGCA TCGACCAGGC CCGGCTCAGC
ACCCTGCTGG CTCCGTTGCT CGATGTGCTC GAGGTCCTGC ATGCACAGGA CTGCTTCCAC
CGCGATATCG CCCCGGACAA CATCTTCGTG CAGCGCGATG GCAGCCCCGT GCTGCTGGAT
TTCGGCGCCG CGCGCCGCAT CATCGGCGAC ATGACCCAGG CGCTGACCAT GGTGCTCAAG
CCCGGTTTTG CGCCCATCGA GCAGTACGTG GACGACGGCG CCATGCCCCA GGGCGCGTGG
ACGGACATCT ACCAGGTCGG CGCCCTCATT CACCAGGCCG CCACGGGCCG CACTCCTGCC
ACCTCGGTGG CGCGCATGGT CACGGACCCC ATGCAGCCGC TGACTTCCGA GCAGGTTCCC
GGCTACTCCG ACGCCTTCCT GCAGGGCATG CAAAAAGCCC TGGCCGTGCG CCCGCAGGAT
CGTCCCCAGT CGATTGCCGA ACTGCGCAGC CTGCTGGGCC TGTCTGCCGA AAACCGGGCG
GCGCCTGCGC CTGTGGAGCC CAGCCCCAGC CCCATCTACA TCCCGATCAC GACGCCTGCG
GCCGTTCAGG CCGCCATGGC CAGCGAGTCG GCATCGGCGC AGGCACCCCG GTTCCTGCCG
ATCACGGAAA CCTACGTTCC CGCACCCACC CCACAGGTTG CGCCCATGGC GACGGTCATG
CCTGTGCCAC CTGTGCCACC TGTGCCGCCT GTTGCAACGG TTCCACCCGT GGCCCCGGCA
TCACCGGCCC CCAGCACACC TGCTGCCATG GCCACGCCTC AGATGACACC CCCATCTGCG
CCCCAGGCCT CTGCAGCCGA CCCGATGGGC CTGGGCAACG GCCCGTTCAT CGACATCGAC
CAGGCACTGC CAGGCATGCC GGCGCCTCAG GCTCCGGCTT CAGCACCGGC ACCCGTTCCC
GAGCAGCCCG CCGCAGCGCC GGCCGCCCAG GCCAAGCCTG CGGCTGCCCG GCCTCCAGCT
GCGGGGGCCC AGGCTGCACC CAAGGCCAGG CGCAGCAGCA TGGCCGTACC GTTGGCCATC
GGCGCCCTGG TGCTGGCTGC CATCGCGGGC GGCGGCGTGC TGTGGTACGA CCATTCCCAG
GACCAGGCAC GCGCCAAGAC CCTGGCAGCA CGCGACAGCC TGGCCTGGCA GCAGGCGCAA
AGCCAGTCCA GCCTGGCCCG CCTGCAGGAC TACCTGGACA GCTTCCCCGA AGGACAGCAC
CGCACCGAGG CCCAGGCGCT GCTCAAGCAA TTGCTCAACG AGGCCTCGCT GGCCTCCACG
GAGCAGGTGC AGCCGATGAC CTCGCCCGAG CAGCAGGCCG CGTTGCCCGA GATTGCCCCT
TCGCAGCCCG AGCAGAGCAC GCCCGTCGTC CCCGTCACGG TGGCCACCGG CTCCGAGCCG
CTGCCCGCCG AGCCGCCCAA GACCGACGCC CGCCCCGTCA AGCCCGCAGC GGCCACGGGC
AAGGTGGTGT TCCGGGTCGT GCCCTGGGGC TATGTCTCCG TGAACCGCGC CCCGGCACGG
ACCAGCCCGC CGCTGACCCA GATGGAGCTG CCAGAGGGCG AGTACCGCAT CGACATCAGC
AACCCGGGTG CGGCCTCCAC GGTGACCAAG ACCATCACGG TCACCAAGGG CGAGTCGGTG
ACCGTGAACC ATCTTTTCGA ATGA
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| Protein sequence | MDSEAACSTN CLPAGVQIGE YRVLDVIGEG GFGIVYKARD LSLDREVAIK EYMPSALAGR
QSSHQVHVRS QHRGAFDAGL RSFINEARLL ARFSHPTLVH VYRFFEAGGT AYMVMRHYEG
QTLGRVLQAS SGRIDQARLS TLLAPLLDVL EVLHAQDCFH RDIAPDNIFV QRDGSPVLLD
FGAARRIIGD MTQALTMVLK PGFAPIEQYV DDGAMPQGAW TDIYQVGALI HQAATGRTPA
TSVARMVTDP MQPLTSEQVP GYSDAFLQGM QKALAVRPQD RPQSIAELRS LLGLSAENRA
APAPVEPSPS PIYIPITTPA AVQAAMASES ASAQAPRFLP ITETYVPAPT PQVAPMATVM
PVPPVPPVPP VATVPPVAPA SPAPSTPAAM ATPQMTPPSA PQASAADPMG LGNGPFIDID
QALPGMPAPQ APASAPAPVP EQPAAAPAAQ AKPAAARPPA AGAQAAPKAR RSSMAVPLAI
GALVLAAIAG GGVLWYDHSQ DQARAKTLAA RDSLAWQQAQ SQSSLARLQD YLDSFPEGQH
RTEAQALLKQ LLNEASLAST EQVQPMTSPE QQAALPEIAP SQPEQSTPVV PVTVATGSEP
LPAEPPKTDA RPVKPAAATG KVVFRVVPWG YVSVNRAPAR TSPPLTQMEL PEGEYRIDIS
NPGAASTVTK TITVTKGESV TVNHLFE
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