Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3407 |
Symbol | |
ID | 5748993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 3740628 |
End bp | 3740912 |
Gene Length | 285 bp |
Protein Length | 94 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641298512 |
Product | VRR-NUC domain-containing protein |
Protein accession | YP_001564430 |
Protein GI | 160898848 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000000101416 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.000615359 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | TTGAACATGC CCCGTGAATC AGCCATCGAG CGCGCCGACC GCAAGAACCA CAAGGCTGCC GGCCGCCTGC TGCTGAAGTT TGTCAGCCCG GGGCGAAACG GCATGCCCGA TGACATTTTG CTCAACCCTA TCCCGCCAGA GCACCAAGAA CTGGTGGCCC GATATTTCCG CTTCGTTGAA TACAAGAAAC CGAAAGCGAC GCCGCGAGCC GACCAATTGC GCCGCCACGC TGAATTGCGC GCGTTGGGTT TTACTGTCGA TGTGATCGAC AGCCAATCAG CATAA
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Protein sequence | MNMPRESAIE RADRKNHKAA GRLLLKFVSP GRNGMPDDIL LNPIPPEHQE LVARYFRFVE YKKPKATPRA DQLRRHAELR ALGFTVDVID SQSA
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