Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3111 |
Symbol | |
ID | 5748695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 3427571 |
End bp | 3428065 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641298214 |
Product | nickel responsive regulator |
Protein accession | YP_001564134 |
Protein GI | 160898552 |
COG category | [K] Transcription |
COG ID | [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain |
TIGRFAM ID | [TIGR02793] nickel-responsive transcriptional regulator NikR |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0944552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTCCCGC CACCTGTTTC CCCACTTCTG CTGCCCATGG AACGCTTCAC CATCTCCATC GACGACGACC TGGCCCGTGA TTTCGACGGC TGGATCGCCG CGCGCGGCTA CGACAACCGC TCCGAGGCCA TCCGCGACGT GCTGCGCGCC CACCTGGCCC AGGTGCGCGA GCGCGAGGAC GCCGACGGCC TGTGCGTGGC CAACCTGTCC TATGTCTACA ACCACCACGA GCGCGACCTG TCCGAGCGCC TGGCCAGCCT GCAGCACGAC CACCACGAAC TGCACATGGC CACCACCCAC GTGCACCTGG ACCACGAGCA ATGCATTGAA ACCGTCATGC TGCGCGGCCC GGCCAGCGCC GTGCGGCGGT TTGCCGACAC CATCACGGCC GAGCGCGGCG TGCACCATGG CCAGCTCAAC GTGGTTATGG CGCGCAGGGC AGAGCCTGGT GGGCACGATC ACGCGCACCA CCATCCGCAT TCGCACGACG ATTGA
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Protein sequence | MFPPPVSPLL LPMERFTISI DDDLARDFDG WIAARGYDNR SEAIRDVLRA HLAQVRERED ADGLCVANLS YVYNHHERDL SERLASLQHD HHELHMATTH VHLDHEQCIE TVMLRGPASA VRRFADTITA ERGVHHGQLN VVMARRAEPG GHDHAHHHPH SHDD
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