Gene Daci_2916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2916 
Symbol 
ID5748498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3201488 
End bp3201952 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content69% 
IMG OID641298017 
ProductMerR family transcriptional regulator 
Protein accessionYP_001563939 
Protein GI160898357 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.221684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.314176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAGC ATGAATCTGC GCGCTGGCGC ATCGGCGAGG CGGCCAAGCG TTCCGGCGTG 
GCCGCCGCCA ACATCCGCTA CTACGAGAAG GAAAGGCTGC TCAGTGCAGG CGTGCGCGAG
GACAACCAGT ACCGGCTGTA CAGCGACAGC GATGTGCACC GGCTGCGCTT CATCCGCCTG
TGCCGCGCCA TGGACATGTC GCTGGACGAG GTGCGCACCC TGCTGGCGCT GGACGGCGCC
AGCAAGGCCG ACTGCGTGGC CGCCAACGAA ACCCTGGATG CCCATCTGGG CCATGTGCGC
GAGCGCCTGG CCGAGCTGCG CGCGCTGGAG CATGAGCTGA TGCAGCTGCG CAGCCAGTGC
GACGGCTCGG CCAGCTACTG CCATCTGATC GAGGCCCTGC ACGCCCAGGC CGACGAACCG
CTGGCACCCG CCCTGGGCAG CTCCGGCGCC AAGCGCCATG TGTAG
 
Protein sequence
MSQHESARWR IGEAAKRSGV AAANIRYYEK ERLLSAGVRE DNQYRLYSDS DVHRLRFIRL 
CRAMDMSLDE VRTLLALDGA SKADCVAANE TLDAHLGHVR ERLAELRALE HELMQLRSQC
DGSASYCHLI EALHAQADEP LAPALGSSGA KRHV