Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2686 |
Symbol | |
ID | 5748262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2956904 |
End bp | 2957512 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641297781 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001563709 |
Protein GI | 160898127 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0616794 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACACCC ATCCAAAGCA TCTGCCGGCC GATGAACGTC GTGCCGTAAC TGTCGAGTCC GTCGTGGCGC TTGCCGGTTC ACAAAACCCA AGCGAGATAA CCACTGCAGC TATCGCTAAA CACATGAACT TGACCCAGGG TGCGCTGTTT CGGCACTTCC CGAACAAGGA AGCCATTTGG CAGGCGGTCA TGGAGTGGGT AGCAGAGCGC CTATTAGCCA GAATCGATCG ATCCGCACAA GGAATCGAGT CGCCCTTGGC AGCCATGGAG GCGATGTTCA TGAGTCATAT CGAATTCGTA GCTGAGCACC CAGGCGTGCC AAGAATGATG TTTGGTGAGC TTCAGCGTGC CGAATCGACA CCGGCCAAGC GCATGGTGCA AACCTTGATT CAGCGCTACG GCGAACGTTT GCATCGTCTC ATCGAGAAAG GCAAGGCCAG CGGCGAGTTG TCTCCCTCGC TTGACAACGA GGCGGCGGCA ACGCTGTTCA TTGGCACGAT CCAGGGCTTG GTCATGCAAT CGCTGTTGGC GGGTGATGTG GGACGTATGC ACGGCGATGC GCCGCGCGTC TTTGCAATTT ATCGGCGTGG CATAAGGAGT GCGCAATGA
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Protein sequence | MDTHPKHLPA DERRAVTVES VVALAGSQNP SEITTAAIAK HMNLTQGALF RHFPNKEAIW QAVMEWVAER LLARIDRSAQ GIESPLAAME AMFMSHIEFV AEHPGVPRMM FGELQRAEST PAKRMVQTLI QRYGERLHRL IEKGKASGEL SPSLDNEAAA TLFIGTIQGL VMQSLLAGDV GRMHGDAPRV FAIYRRGIRS AQ
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