Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1981 |
Symbol | |
ID | 5747539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 2164772 |
End bp | 2165710 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641297060 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001563006 |
Protein GI | 160897424 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTCCGA TGTGTCCGAT GCCGCCCTCC AGTCCCATGG CCCCACCCAC CCATATGCCG CCGCTGTCCG CCCTGCGTGC CTTCGAGGCC ACGGTGCGCC ATGGCAGCGT TTCCAAGGCC GCGCGCGAGC TGCACCTGAC CGATGGCGCC GTGAGCCGCG CCGTGCGCGA CATGGAAGAG GCGCTGGGCT TTGCGCTGTT CCAGCGCAGC AACCGCAGCA TCATTGCCAC CCCCACGGCG CGTGTGCTGG CCGAGGAGGT GGCCCTGGCG CTGGAGCGCC TGCGCGGCGC GCTGGGCCGA GCGCGGCAGG CCGCCGGGCC GGACCGGCCG CTGGTGCTGT CCTGCGAGCC CACCTTTCTG ATGCGCTGGC TGATTCCCCG CCTGGGCGGT TTGCAGGAAG CGATCGGCAC GCAGCGCGAG CTGCGCCTGG TATCGGCCGG CGGCTCGGTG CCCTTTGCGC GTGAAGGCAT CGATCTGGCC ATACGCCGCG CGGATTTCGA CTTGGGCGCC GATGTGGTTG CCGAGCCCTT TTTGCAGGAG CACGTGGGTC CCGTGTGCCG GCCTGCACTT GCGAAGACGC TGGCACGCTC CGGGCCGCTG GGCGGCGTGC TGCTGCACAC GGCATCGCGC CCGGACGCAT GGCGGCATTG GAGTGAGCTG ACCGGCGTGC CGCTGCAGCC CGGGCGCGAG GCCCGCTTCG AGCATTTCTA CCTGAGCCTG CAGGCCGCCG TTGCCGGGGC GGGCATTGCC ATCGGGCCGC TGGCGCTGGT GGCCGACGAT CTGGCCAGCG GCACCCTGTG CGCGCCGCGC GGCTTTGTGG CCGACGGCTC GCACTACGTG CTCATGTCAC CCAGGCCGGT GCATGACGAG GCCCGCTTCG CCCTGGTGCT GGAGTGGCTG CGCACGCAGA CATTGCCGCT GGCGCGGGCC GACGCATGA
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Protein sequence | MCPMCPMPPS SPMAPPTHMP PLSALRAFEA TVRHGSVSKA ARELHLTDGA VSRAVRDMEE ALGFALFQRS NRSIIATPTA RVLAEEVALA LERLRGALGR ARQAAGPDRP LVLSCEPTFL MRWLIPRLGG LQEAIGTQRE LRLVSAGGSV PFAREGIDLA IRRADFDLGA DVVAEPFLQE HVGPVCRPAL AKTLARSGPL GGVLLHTASR PDAWRHWSEL TGVPLQPGRE ARFEHFYLSL QAAVAGAGIA IGPLALVADD LASGTLCAPR GFVADGSHYV LMSPRPVHDE ARFALVLEWL RTQTLPLARA DA
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