Gene Daci_1865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1865 
Symbol 
ID5747422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2063004 
End bp2063990 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content70% 
IMG OID641296943 
Producthypothetical protein 
Protein accessionYP_001562890 
Protein GI160897308 
COG category[S] Function unknown 
COG ID[COG2510] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGAT ATGAGCACAT AGTACGCGCC ATGAATTTTC AACGCTTCTT CGGTCCCCAC 
CTGCGGCTTG TCGGCATGGC CCTGCTGTGG GGCGCTTCCT GGCCTGCAGG CCGCGTGGTG
GCACAGAACA TGCCGCCGCT GGCCGCCGCC AGCCTGCGCT TCCTGCTGGC CGCCGCCGTG
CTGCTGCCCT GGCTGTACTG GGCCGGTGGC ATGGCCGGTC TCAGGCACTG GAGCGCCAAA
CGCTGGCTGG GCATGGCGGC CGCTGGCGCC ACGGGCGTGT TCGGCTATGC GGCCTTTTTC
CTGATGGGGC TGCAGCATGT GCCGGCCGGC AAGGCGGCCC TGGTGATCAC GCTCAACCCC
GTGCTCACGC TGGCGCTGGC GGTCTGGTTG TTCGGCGAGC GGCTCAACCG CACCATTGCC
CTGGGCATGG CGCTGGCGGC CTGCGGCGCC GTGGTGGTGA TCTCGCATGG CCAGCCGCTG
GCGCTGCTGC AGGGATCGGT GGGCGCCGGA GAGTTGCTGA TCCTGGGCTG CGTGGTGTGC
TGGGTGACCT ACACCCTGAT CGGCCGCTGG CTGCTCACGG GTGTCGATGC GCTGTCGGCC
ACGGCCGTGA CCTCGACCAT GGGCGCGGCC ATGCTGCTGG TGGCCAGTCT GGTGGTGGAA
GGGCCGGCCG GCCTGCAGGC TGCCGTGCTT GGCAACGCAA CCGCCTGGGG CGCGCTGGCC
TTCCTGGCCT TCGGCGCCAC GGCGCTTGCC TATGCCTGGT ATTTCGACGG CGTCAAGGCG
CTGGGTGCGG GTGCGGCCTC GGGCTACATC ACCCTGGTGC CCGTGATCGG CGTGGCGCTG
TCGGCGCTGT GGCTGGGCGA GAGCATCGAT GCCAGCATCG TTCTGGGCGG CGGCATGGCC
GTGGCCGGCA CGGCGCTGAT GAACTGGGGG CGCAGGCCTG CGGCTGCGGT GCACGTGGTT
GCCAAGCGCA CCGCAGTCCA GAGCTGA
 
Protein sequence
MNRYEHIVRA MNFQRFFGPH LRLVGMALLW GASWPAGRVV AQNMPPLAAA SLRFLLAAAV 
LLPWLYWAGG MAGLRHWSAK RWLGMAAAGA TGVFGYAAFF LMGLQHVPAG KAALVITLNP
VLTLALAVWL FGERLNRTIA LGMALAACGA VVVISHGQPL ALLQGSVGAG ELLILGCVVC
WVTYTLIGRW LLTGVDALSA TAVTSTMGAA MLLVASLVVE GPAGLQAAVL GNATAWGALA
FLAFGATALA YAWYFDGVKA LGAGAASGYI TLVPVIGVAL SALWLGESID ASIVLGGGMA
VAGTALMNWG RRPAAAVHVV AKRTAVQS