Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0966 |
Symbol | |
ID | 5746520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 1076929 |
End bp | 1077996 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641296046 |
Product | porin |
Protein accession | YP_001561997 |
Protein GI | 160896415 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCA TCCATACGCC CATGCTGGGC GTGGCGCTAG CCTGCCTGGC GTCCTTGCCC GGGGCCGCTT CGGCGCAGTC CAAGGTCGAG ATCTTCGGCG TCGTCGATGT CGGCGTCACG CACCTGAACG GCTCCGGCCC CTCCAAGACC GGCCTGTCCA CGGGCGGCGC CAACATCAGC CGCATCGGCT TTCGCGGCAC GGAAGAGCTG GGCGGCGGCC TGCGCGCTGG CTTCTGGCTG GAGGCGGGCA TGGACGTGGA CAGCGGCTCG GGCAAGGCCA GCGGTGGCGG CCTGAGCTTC AACCGCCGCT CCACCGTGAG CCTGTCGGGC GACTTCGGCG AAGTGCGCCT GGGCCGCGAT GACTCGGCCA CCTTCCTGAG CACGCTGATC TTCGACCCCT TCCTCACCAA CGGCGTGGGC GGCACCATGG GCTTCACCAT GCTGGGCATT CCCGGCACGG GCACGGCCAC GGGCGGCGCG CCCATCCAGA TCAGCAACGC GGTCAGCTAC TTCCTGCCGC AGAACCTGGG CGGCTTCTAC GGCCAGGTGC AGGTGGCCAT GGGCGAGCAG GCGCGCAGCG CACCCAACAA GAACCAGGGC GACTACCGCG GCCTGCGCTT CGGCTACCGC CAGGGCCCCT TCAACGGCGC GCTGGCCACG GGCAAGTTCT ATGGCGACAG CGATGCGACC AACCTCACGG CCAGCAACGT GGGCCTGAGC TGGGACTTCG GCGTGGCCAA GCCCATGCTG CTGTGGGCCA GCGAAAAGCG CGGCGCCCTC AAGGTCACCG CCCTGCAGCT GGGCGTGACC GCGCCCGTGG GCATGGGCGA GTTCAAGGCT TCCTACGGCC ACTACAACAC CGACGGCAGC AATGCCGACT GGAACAAGAT CAGTGTGGGC TACGGGCACA ACCTGTCCAA GCGCACCCAG GTCTACGGCA CGGTGGCCTT CCTCAAGAAC AAGGACGGCG CGGCCAAGTC CATCGGCGTG CAGGGCCTGT CGGCCCCGGG CACCACGCTG GGTGGCCGCT CCTCCGGCTT CGAGGTGGGC GTGCGCCACT TCTTCTGA
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Protein sequence | MKTIHTPMLG VALACLASLP GAASAQSKVE IFGVVDVGVT HLNGSGPSKT GLSTGGANIS RIGFRGTEEL GGGLRAGFWL EAGMDVDSGS GKASGGGLSF NRRSTVSLSG DFGEVRLGRD DSATFLSTLI FDPFLTNGVG GTMGFTMLGI PGTGTATGGA PIQISNAVSY FLPQNLGGFY GQVQVAMGEQ ARSAPNKNQG DYRGLRFGYR QGPFNGALAT GKFYGDSDAT NLTASNVGLS WDFGVAKPML LWASEKRGAL KVTALQLGVT APVGMGEFKA SYGHYNTDGS NADWNKISVG YGHNLSKRTQ VYGTVAFLKN KDGAAKSIGV QGLSAPGTTL GGRSSGFEVG VRHFF
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