Gene Daci_0140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0140 
Symbol 
ID5745676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp152186 
End bp152995 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content69% 
IMG OID641295202 
Producthypothetical protein 
Protein accessionYP_001561171 
Protein GI160895589 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG5266] ABC-type Co2+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.621783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.143502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAA CCCCATCCAA GCGATTGGCC TGGTGGCTGC CGCTGCTGTC GGCCGTGTGC 
ATCTCCGCCC AGGCCCATAC GCCCTACCTG CTGCCCACCA GCTTCGAGGC TTCGCCCCGG
GCCGTCATCA GCGTGGACGC CAGCTTTGCC GACAAGTTCT TCATCCCCGA AGTGGCTTTT
GGCGAAACGC GCTTCACCGT GACGGCGCCC GACGGCTCGG TCACGCCCAT GGCCGATGTG
CGCCAGTTCA AGACCCGCAC CGTCGCCGAG CACCAACTGC CCGACGAGAA GGGCACCTAC
CGCGTGAGCA CCGGCCCGCG CCTGGGCGCC GTCTTCCGTT CGTGGGAGCG CAACGGCAAG
GTGGAGACGG CGCGTGATCC CGCCACGCCC ACGCCGGCCG ATGCCAGGCT GCTGAGCCAC
TACCAGTCGC TGTCGGTCTC CGAGACCTAC ATCACGGTGG GCAAGCCCAG CCGGGCCGCG
CTCGCGCCCT CAGGCAAGGG CCTGGAGATC GTGCCCGTCA CGCATCCCGC CGACCTGTTC
GCGGGCGAGA AGTTCGACTT CACCGTGCAA TACGACGGCA AGCCGCTGGC CGCGCAGAAG
GTGGAAATCT TCCGCTCGGC CATGGACCTG GCCAGCCAGC ACAGCGTGGA CGCGCTGACC
ACCGATGGCG AGGGCCGCAT CTCCTACGCC CTGCCCAAGT CCGGCATCTA CCTGGCCCTG
GTGCGCTACC GCGCCGACGC CCCCGCCGGC GCCGCCGCGC CGCAGTACGG CAACAACTAC
ACGCTGACCT TCAGGGTGCT GGCGCAGTAA
 
Protein sequence
MAKTPSKRLA WWLPLLSAVC ISAQAHTPYL LPTSFEASPR AVISVDASFA DKFFIPEVAF 
GETRFTVTAP DGSVTPMADV RQFKTRTVAE HQLPDEKGTY RVSTGPRLGA VFRSWERNGK
VETARDPATP TPADARLLSH YQSLSVSETY ITVGKPSRAA LAPSGKGLEI VPVTHPADLF
AGEKFDFTVQ YDGKPLAAQK VEIFRSAMDL ASQHSVDALT TDGEGRISYA LPKSGIYLAL
VRYRADAPAG AAAPQYGNNY TLTFRVLAQ