Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0127 |
Symbol | |
ID | 5745663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 138528 |
End bp | 139286 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641295189 |
Product | ABC transporter related |
Protein accession | YP_001561158 |
Protein GI | 160895576 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.713745 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.982283 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGTGA TGAATGCCCA CTCCCCCGCG CCCACGGCGG CGCCCCGCAC GGCACCCAGC CTGGAGGCCG TGCGCCTGTG CAAGTCTTTC CTGTCGGGCA TGGTCAGCGT GCAGGTGCTG CAAGGCCTGT CCGTGTCGCT GTACCCGGGC GAGCTGAGCC TGATCTCCGG GCCCTCGGGC TGCGGCAAGA GCACGCTGCT GTCGCTGATG TCGGGCCTGC AGGCGCCCGA CAGCGGCCAC GCCATGGCGC TGGGCGAGGA CCTGGGCAAG CTGGGCACGC GGGCGCTGGA GAAATTCCGC CTGCGCCACA CGGGCTTCGT CTTCCAGGGC TTCAACCTGT TCCCGGCGCT GACGGCCATC GAGCAGGTAC AGCTGCCCCT GGGCTACATG GGCCTGCGCA GCGACGAGGC CCTGCGCCGC GCCCAGCAGG CGCTGGACGA GGTCGGCCTG TCCCACCGCA GCCACATGCG CCCGGCCGAA CTGTCGGGCG GCGAAAAGCA GCGCGTGGCC ATCGCCCGCG CCATGGCCAA GGCGCCGCAG CTGCTGTTTG CCGACGAACC CACGAGTGCG CTGGATGCCG AAAGCGGCCA GCGCGTCATC GACATCCTGC ACCGCGCGGC GCGCAACCAT GGCACGACCG TGCTGTGCGT GAGCCATGAC CCGCGCCTGG TGCGCCATGC CGACCGCGTG CTCGGCATGG AGGACGGCGC CATCCGCAGC GACTGGCGCC AGTCCTGCCC CATCAAGGAA AAAGAATGA
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Protein sequence | MNVMNAHSPA PTAAPRTAPS LEAVRLCKSF LSGMVSVQVL QGLSVSLYPG ELSLISGPSG CGKSTLLSLM SGLQAPDSGH AMALGEDLGK LGTRALEKFR LRHTGFVFQG FNLFPALTAI EQVQLPLGYM GLRSDEALRR AQQALDEVGL SHRSHMRPAE LSGGEKQRVA IARAMAKAPQ LLFADEPTSA LDAESGQRVI DILHRAARNH GTTVLCVSHD PRLVRHADRV LGMEDGAIRS DWRQSCPIKE KE
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