Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0052 |
Symbol | |
ID | 5745588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 57079 |
End bp | 58113 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641295115 |
Product | peptidoglycan binding domain-containing protein |
Protein accession | YP_001561084 |
Protein GI | 160895502 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.716094 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAGAAGT ATCTTGCCCT GACCGCCATC GCTGCCGTGG CGCTGACCGG CTGCGTGACC ACCGACATGC GCATGGGCTC GCCCGAAGCC AAGACCGTGG CCACGGGTGC CGCAGGCGGT GCCAGCGCCG AGAACGCCAA TACCGAGCTG GAGCGTTGCG ACTCCTCGCT GGGCACCATC TCCCTGGTCG AGAACCAGAC CGCGGGCTGG TACACCATCC TCACCCAGCA GTACCGCCTG CCGCCCACCT CGCAGCTGCT GCGCCTGATG ATCCAGCAGT CCAACTGCTT CATCGTCGTG GAACGCGGCG CGGCCGGCAT GGGCGCCATG GCGCGTGAAC GCGCGCTGAT GGACTCGGGC GAAATGCGCG GCGGCAGCAA CCTGGGCAAG GGCCAGATGG TGGCCTCCGA CTACGGCCTG TCCCCCGAAG TGATCTTCAA CCAGAGCGAT GCCGGCGGCA TGGGCGGCGC CATCGGCGGC CGCGCAGGCG GCATCTTCGG CGCGCTGGCT GCAGCCACCA AGACGCGCGA GGCCTCGGTC ATGCTGGCCC TGGTGGACAA CCGTTCGGGC GTGCAGGTGT CGGCTTCCGA AGGCTCGTCT TCCAAGACCG ACTGGGGCGG CATGGGCGCG CTGTTCGGCG GCTCCGCCGG CGCCTCGCTG GGCGGCTACA CACGCACGGC CGAAGGCAAG GTGATCGCCG CCGCCTTCAT GGACGCCTAC AACCAGATGG TTCGCGCGCT GCGCAACTAC AAGGCTCAGA CCGTCAAGGG CCAGGGCCTG GGCGGCGGTG GACGCCTGGG CGTGGACGGC GGTGCCGCAC CGTCGCAGAC ATCGGCTCCG GGCGCCAATG CCGCCGGCAT GTCGCTGCGC GCCGCACAGC AAAAGCTCAA TGCCCTGGGC TACACCGCAG GCACGCCTGA CGGCTCCATG GGCAAGAACA CCCAGAACGC CCTGCGCGAG TTCCAGCGCG ACCAGAGCCT GCCGCAGACC GGCCGCCTCG ACCGTGCCAC CTCGCAAGCA CTGCAACAGC AATGA
|
Protein sequence | MKKYLALTAI AAVALTGCVT TDMRMGSPEA KTVATGAAGG ASAENANTEL ERCDSSLGTI SLVENQTAGW YTILTQQYRL PPTSQLLRLM IQQSNCFIVV ERGAAGMGAM ARERALMDSG EMRGGSNLGK GQMVASDYGL SPEVIFNQSD AGGMGGAIGG RAGGIFGALA AATKTREASV MLALVDNRSG VQVSASEGSS SKTDWGGMGA LFGGSAGASL GGYTRTAEGK VIAAAFMDAY NQMVRALRNY KAQTVKGQGL GGGGRLGVDG GAAPSQTSAP GANAAGMSLR AAQQKLNALG YTAGTPDGSM GKNTQNALRE FQRDQSLPQT GRLDRATSQA LQQQ
|
| |