| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3350 |
|---|
| Symbol | |
|---|
| ID | 5741632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 4081659 |
|---|
| End bp | 4085540 |
|---|
| Gene Length | 3882 bp |
|---|
| Protein Length | 1293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641294453 |
|---|
| Product | phosphoribosylformylglycinamidine synthase |
|---|
| Protein accession | YP_001560442 |
|---|
| Protein GI | 160881474 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
[COG0047] Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain |
|---|
| TIGRFAM ID | [TIGR01737] phosphoribosylformylglycinamidine synthase I
[TIGR01857] phosphoribosylformylglycinamidine synthase, clade II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.611392 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGAAGTG TCAAAAGAGT ATATGTAGAG AAAAAAGTAC CTTATGCAGT ACGTGCTAAA
GAGCTAAAAG AAGAGCTTAG AAGTTATTTA GGGCTTAAGA CACTTACAAA TGTGCGTGTT
TTAATCCGTT ATGATATAGA GAATGTAAGT GATGAAACCT ATCAAAAAGC ACTCGGTATC
GTGTTTTCAG AGCCACCAGT AGATGATTTA TATGAGGAAA AGTTTCCATT CGCATCAGGG
GATAGAGTAT TTTCCGTGGA ATATCTCCCT GGACAATTTG ACCAGCGTGC AGATTCTGCG
GAGCAGTGTG TAAAGCTCTT AAATGAAAAA GAAGAGCCAG TCATTCATTG TGCAACAACT
TATGTATTAG ATGGTACGTT AGGGGAAGAA GATTTTGTTC GTATCAAACA ATATTGTATT
AACCCTGTGG ATTCTAGGGA GACAGATGAG GTAAAACCAG AAACTTTAAT GACAGAGTTT
GAAACACCTG AGGATATATC CTATTTAATT GGTTTTCAAA GTATGGGGGA GACGAAGCTT
CTTTTATTAT ATGAATCTTT AAATTTAGCA ATGACTTATG CTGATTTTAA ACATATACAA
AATTATTTTA AAGTGGAAGA AAAGAGAGAC CCTTCGATTA CGGAAATTCG TGTTCTAGAC
ACTTACTGGT CCGATCATTG CCGCCACACC ACTTTCTTAA CGGAGTTAAC TAAGGTAGAT
TTTGAAGAAG GTTATTATAA GGAGCCAATT AAGGCTGCAT ATGAAGATTA TAAAGCGAAT
AGAGAGATCC TTTATAAAGA TAGAGATGAT AAGTACATTT CGTTAATGGA CATTGCATTA
CTTGCGATGA AGAAACTAAA GGCAGACGGG AAGCTTGAGG ATATGGAAGT TTCCGATGAA
ATCAACGCCT GTTCTATCGT AGTTCCGGTT GAAATTGATG GTGTGACAGA AGAGTGGTTG
GTATTTTTTA AGAACGAGAC TCATAACCAT CCAACCGAAA TTGAACCATT TGGTGGAGCA
GCAACTTGTC TTGGAGGAGC AATTCGTGAT CCATTATCCG GACGTGGTTA TGTTTATCAA
GCAATGAGAG TAACTGGAGC AGCTGACCCG ACGGTATCCT TAAAAGATAC CTTACAAGGT
AAACTTCCAC AAAGAAAGAT TGTAACAGGA GCTGCGAAAG GTTATAGCTC TTATGGAAAT
CAAATCGGTC TTGCGACTGG ATTAGTAGAT GAAATCTATC ATCCAAATTA CGTTGCAAAA
CGAATGGAGA TTGGTGCTGT TATGGGTGCT GCACCAAGAA AAAATGTGAT TCGAGAAAAT
TCCGAGCCAG GTGATATCAT TATTTTAATG GGTGGTCGTA CTGGTCGTGA TGGCTGTGGT
GGTGCTACGG GTTCCTCTAA AGTACACACA ACAGAATCCA TTCAGACTTG TGGTGCAGAG
GTACAGAAAG GTAACGCACC TACCGAGCGT AAATTACAGA GACTTTTCCG CCGCGAGGAA
GTATCTAAAT TAATTAAGAA ATGTAATGAC TTTGGAGCAG GTGGTGTGTC TGTTGCTATT
GGAGAATTAG CAGATGGTCT TCGTATTGAT TTAGATAAGG TTCCTAAAAA GTATGCTGGT
TTAGATGGTA CAGAACTTGC GATTTCTGAA TCTCAGGAGC GTATGGCCAT TGTTGTAGAT
AAAAATGACG TAGAGCAGAT GCTTGCATAT GCAAATGAGG AGAATCTGGA GGCTGTAGAA
GTAGCAGTGG TTACGGAAGA GCCTAGATTA GTACTTAACT GGCGTGGAAA AGTAATTGTT
GATATCTCAA GAAAATTCTT AGATACCAAT GGGGCACATC AGGAGGCAAC TGCAGTAGTA
ACAATACCAA AGGCAGAGGA GAACTATTTT AAAGCGGGTG CATTCTATCC TGCTGCTAAG
ACTGTAAAGT TACATGGTGA AGTGTCTGAA ACTTCTTCGG AAGAAACTTC TAAGGGGCAA
ACTCTTTGTG AGGAAATGGG TAAAAAGGTT GATAACTCTA TCAAAGAACA GTGGTTATCA
ATGCTTTCTG ACTTAAACAT CTGTTCCAAA AAAGGATTAG TAGAGATGTT TGATAGCTCC
ATCGGTGCAG CTACGGTAAC GATGCCATAT GGTGGGAAAT TTCAGTTAAC ACCTGTTCAG
ACAATGGTAG CAAAACTACC AGTTCTTCGT GGTGCATGTG ACACCGTAAC GATGATGAGC
TATGGATATG ATCCTTACTT AAGCAGCTGG AGCCCTTTCC ATGGTGCGGT ATATGCAGTA
ATTTCTTCTG TTGCTAAAAT TGTGGCAGCA GGCGGTGATC ATAAAAAGAT CCGATTTACC
TTCCAGGAGT ATTTTAGAAG GCTTGGTAAT GATGCACGTC GATGGGGTGA ACCATTAACT
GCATTGCTTG GAGCTTATGA TGCTCAAATG AAGCTGGGAC TTCCATCGAT TGGCGGTAAG
GATAGTATGT CAGGGACTTT CAATGACATT GATGTACCAC CTACCTTAGT ATCCTTTGCG
GTTGATGTAG CGAAAGCAAA TGAGGTAGTT ACCTCTGAAT TAAAAAATGC TAGTAATCGT
TTGGTACGTT TCTCTATAGA GAAGGATTCC TATGATTTAC CTGAATATGA AAAGCTACAA
CATCTATATC AAGCGATTAC GAAATTAATT CATGAGAAGG TTATCGTATC GGCATATGCT
TTAGGTGCTA AGGGTATTGC GGAAAGTGTT TCTAAGATGG CATTTGGTAA TCAGTTAGGA
GTTGATTTTG ACCCTAATCT TACAGATTCA GATTTATTCG CACCTGCCTA CGGAGATATC
GTAGCGGAAG TAAGTGAATC AGATTTCGTA AAATTAGATG CCCTAAATGT TTCATACCAG
ATGGTAGGTA CCGTTACAGA TACACGCATT TTTAATTATA AAGATATATC TATTACAATG
GAAGAAGCAT TATCTGCATG GTCAAACACG TTAGAAAAGG TATTCCCAAC TCGTTCTAAT
ATGGAAGAAG AAGTAGAGAC AGAAAAGGTT CCATGCTACC TTTTTGATGC AAAGACAATT
TATATAGCAA AGAATAAGGT AGCAAAGCCA AAAGTTTTTA TTCCGGTCTT CCCAGGAACA
AACTGTGAAT ATGATAGCTT ACGAGCCTTT GAACGAGCTG GTGCAGAGGT TAAGACTGTA
GTATTCAAGA ATTTGGATGA GAGAAGTATT ATAGAGTCTG TGGACGCATT TGAGAAAGCA
ATCAAGGAAG CGCAAATCTT AATGTTCCCT GGTGGATTCT CCGCTGGTGA TGAGCCAGAT
GGTTCTGGAA AGTTTATTGC TACAGCTTTT CGTAATGTTC GTATCAGTGA TGCAGTGAAT
GACCTTTTAA AAATAAAAGA CGGTTTAGTA CTTGGTATCT GCAATGGTTT CCAAGCTTTG
ATTAAACTTG GGTTAGTTCC AAATGGAGAG ATTATGCCAC AGACAGTAGA TTCGCCAACC
TTAACGATGA ATAATATTGG ACGTCATATT TCAAAAACGG TGTATACGAA AGTGGTATCG
AATCAATCTC CTTGGTTAAG GAAGGCAGAA CTTGGCGGAG TTTACTCCAT TCCAGCTTCT
CATGGAGAAG GACGCTTTGT TGCAAATGAA GAGTGGCTTA AGAAACTTGC AGCAAATGGA
CAGATTGCTA CTCAATATGT TGATATGAAT GGAAATCCAA CCATGGATGA AAATTATAAT
CCAAATGGTT CCTATTACGC AATTGAGGGT ATCACAAGTC CAGATGGTCG TGTTCTTGGT
AAGATGGCAC ACTCCGAACG TCGTGGAGAT GGAGTAGCTT TAAACATCTT TGGAAATCAG
AATCAGTATA TTTTTGAATC CGGTGTATCT TATTTTAAAT AG
|
|---|
| Protein sequence | MGSVKRVYVE KKVPYAVRAK ELKEELRSYL GLKTLTNVRV LIRYDIENVS DETYQKALGI
VFSEPPVDDL YEEKFPFASG DRVFSVEYLP GQFDQRADSA EQCVKLLNEK EEPVIHCATT
YVLDGTLGEE DFVRIKQYCI NPVDSRETDE VKPETLMTEF ETPEDISYLI GFQSMGETKL
LLLYESLNLA MTYADFKHIQ NYFKVEEKRD PSITEIRVLD TYWSDHCRHT TFLTELTKVD
FEEGYYKEPI KAAYEDYKAN REILYKDRDD KYISLMDIAL LAMKKLKADG KLEDMEVSDE
INACSIVVPV EIDGVTEEWL VFFKNETHNH PTEIEPFGGA ATCLGGAIRD PLSGRGYVYQ
AMRVTGAADP TVSLKDTLQG KLPQRKIVTG AAKGYSSYGN QIGLATGLVD EIYHPNYVAK
RMEIGAVMGA APRKNVIREN SEPGDIIILM GGRTGRDGCG GATGSSKVHT TESIQTCGAE
VQKGNAPTER KLQRLFRREE VSKLIKKCND FGAGGVSVAI GELADGLRID LDKVPKKYAG
LDGTELAISE SQERMAIVVD KNDVEQMLAY ANEENLEAVE VAVVTEEPRL VLNWRGKVIV
DISRKFLDTN GAHQEATAVV TIPKAEENYF KAGAFYPAAK TVKLHGEVSE TSSEETSKGQ
TLCEEMGKKV DNSIKEQWLS MLSDLNICSK KGLVEMFDSS IGAATVTMPY GGKFQLTPVQ
TMVAKLPVLR GACDTVTMMS YGYDPYLSSW SPFHGAVYAV ISSVAKIVAA GGDHKKIRFT
FQEYFRRLGN DARRWGEPLT ALLGAYDAQM KLGLPSIGGK DSMSGTFNDI DVPPTLVSFA
VDVAKANEVV TSELKNASNR LVRFSIEKDS YDLPEYEKLQ HLYQAITKLI HEKVIVSAYA
LGAKGIAESV SKMAFGNQLG VDFDPNLTDS DLFAPAYGDI VAEVSESDFV KLDALNVSYQ
MVGTVTDTRI FNYKDISITM EEALSAWSNT LEKVFPTRSN MEEEVETEKV PCYLFDAKTI
YIAKNKVAKP KVFIPVFPGT NCEYDSLRAF ERAGAEVKTV VFKNLDERSI IESVDAFEKA
IKEAQILMFP GGFSAGDEPD GSGKFIATAF RNVRISDAVN DLLKIKDGLV LGICNGFQAL
IKLGLVPNGE IMPQTVDSPT LTMNNIGRHI SKTVYTKVVS NQSPWLRKAE LGGVYSIPAS
HGEGRFVANE EWLKKLAANG QIATQYVDMN GNPTMDENYN PNGSYYAIEG ITSPDGRVLG
KMAHSERRGD GVALNIFGNQ NQYIFESGVS YFK
|
|---|
| |