Gene Cphy_1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1875 
Symbol 
ID5744554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2308280 
End bp2308927 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content35% 
IMG OID641292972 
Productbeta-phosphoglucomutase 
Protein accessionYP_001558983 
Protein GI160880015 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01990] beta-phosphoglucomutase
[TIGR02009] beta-phosphoglucomutase family hydrolase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAAG GTGTTATTTT TGATTTAGAT GGTGTTTTAG TATCAACCGA TGAACTTCAT 
TATGCAGCAT GGTCGCAGCT AGCTAAGATG ATTGGAATCA CAGAATTTAA TCGTGAGGAC
AATCAAAGAC AAAAAGGTGT AAGCCGCATG GAATCTTTAG AAATTGTCCT AGAAAAAGGG
GAGAAGTGCT ATTCTGATGC GGAAAAGGTT TTGTTAGCAA ATATGAAAAA TGATATTTAT
GTTAACTTGT TAACTGATTT AGATCAGGAA GCAGTTCTTC CTGGGGCAGT AGAAATATTA
ATGAGATTAA AGAAGCTTGA GATTAAAATA GGGATTGGCT CAGTAAGTAA GAATACACCG
ATTATATTAG AAAAGACAGG ATTGATTACT TACATAGATG AAGTTAGTTG CGGATTAGAT
ATAACGAATT CTAAACCGGA CCCTGAAGTT TTTTTGGTAG CAGCGAATAA ACTTGGTTTA
CAACCGAAGG AATGTCTTGT GATAGAGGAT TCTAAGGCTG GAATTATAGC TGCAAGAGCG
GCAGAAATGA GAAGTTTAGC AGTAGGACCA GAACATAAAA AATTAGACGC TGATTATTGT
TCAGAGTCTT TATCAAACGA GTTAGATTGG AATCTGTTAT TAGGATAA
 
Protein sequence
MIKGVIFDLD GVLVSTDELH YAAWSQLAKM IGITEFNRED NQRQKGVSRM ESLEIVLEKG 
EKCYSDAEKV LLANMKNDIY VNLLTDLDQE AVLPGAVEIL MRLKKLEIKI GIGSVSKNTP
IILEKTGLIT YIDEVSCGLD ITNSKPDPEV FLVAANKLGL QPKECLVIED SKAGIIAARA
AEMRSLAVGP EHKKLDADYC SESLSNELDW NLLLG