Gene Cphy_1261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1261 
Symbol 
ID5744867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1591682 
End bp1592389 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content39% 
IMG OID641292367 
ProductABC transporter related 
Protein accessionYP_001558378 
Protein GI160879410 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTTAAAG TAGAAAAGTT ACATACCTAT TATGGAAATA TACACGCTCT TAAGGGGATA 
GACCTTGAGG TAAACAAGGG AGAAATCGTT TCTCTGATTG GTAGTAACGG TGCTGGAAAG
TCAACCTTAC TAAGCACTAT TACAGGCATC GCAAAGGCAC AAAGCGGTAC CATTACCTTT
AAGGGAAATA ACATAACTAA TACAGCTCCT TATCATATTA CAAAAACGGG AATTAGTATC
TCTCCAGAAG GACGTGAAGT ATTCCCAAGT TTAACGGTAG AAGAGAACTT GAGACTTGGA
GCTTACATTG TAAATGATAA GAAAAAGATA GCAGAAGGTT ATGAACGTGT CTATGAGCTA
TTTCCAAGGC TGAAGGAAAG ATATAAACAA AGTGCAGGTA CAATGTCTGG TGGTGAGCAG
CAGATGTTAG CGATTGGACG TGCTTTAATG AGTAATCCAG AATTGCTTTT ATTGGATGAG
CCATCTTTAG GACTTGCACC CAACATCGTA TTACAGATCT TTGACTTAAT AAAATCAATC
AACTCACAAG GGGTTACTAC CCTATTGATT GAACAAAATG CCAATATGGC ACTTAGTGTA
TCAAATCGTG CTTATGTACT TGAAAATGGT GTGGTATCCA TGTCAGGCGA TGCCAAAGAA
ATCGCAGCAG ATCCTAGAGT AAGAAAAGCA TATTTGGGTC ATGCATAA
 
Protein sequence
MLKVEKLHTY YGNIHALKGI DLEVNKGEIV SLIGSNGAGK STLLSTITGI AKAQSGTITF 
KGNNITNTAP YHITKTGISI SPEGREVFPS LTVEENLRLG AYIVNDKKKI AEGYERVYEL
FPRLKERYKQ SAGTMSGGEQ QMLAIGRALM SNPELLLLDE PSLGLAPNIV LQIFDLIKSI
NSQGVTTLLI EQNANMALSV SNRAYVLENG VVSMSGDAKE IAADPRVRKA YLGHA