| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1245 |
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| Symbol | |
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| ID | 5744851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 1571956 |
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| End bp | 1573083 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641292351 |
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| Product | nuclease SbcCD, D subunit |
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| Protein accession | YP_001558362 |
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| Protein GI | 160879394 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTA TGCATTTATC GGACTTGCAT ATTGGAAAAA GAGTAAATGA GTTTTCAATG
ATAGAAGACC AGACATATAT CTTACAAAAG ATTTTGGAAC TTGCAGATGA GGAAAAACCA
GATGCAGTAC TGATTGCTGG TGATGTGTAC GATAAGAATC TACCGACGAT AGAAGGAGTT
AATTTGTTAG ATGATTTCTT ATCAGACTTA CATAAACGTA AGATTCCAGT ATTTATGATT
AGCGGAAATC ATGATTCTGC TGAGCGACTT AATTTTGCAA GCCGTATTTT AAGAAATAAT
GAAGTTTATA TAGCAGGTAC TTATCAAGGG GAGATCGCGC GATATACATT AAATGATGGA
CATGGTCCAG TCAATATCTA TCTGTTGCCA TTTGTAAAGC CTGCCATTGC TTCGGTGTAT
CACGAGGGAA TAGAGTCCTA TCATGATGCG GTGAAGGCGA TTCTTGCAGC AGCGAAGGTA
AATAAAGCGG AGAGAAATAT TCTTGTGGCA CATCAATTTG TAACCGCAGG GGATATTTCA
CCAGAGTGCT GTGATTCTGA AAACATATCA GTCGGAGGGC TTGATAATGT CGATGTAAGT
GTATTTGATG ATTTTGAATA TGTTGCATTA GGACACCTTC ATGGACCACA GCGAATTGGA
AGAGATACGG TTCGTTATGC AGGTTCTCCA CTAAAATACT CCTTTTCGGA AGCGAAACAG
AAAAAATCTG TAACTATGGT AACGATTGAT ACCAAGGGGG AGATTAAACA GGAATATATT
CCTTTGATTC CATTAAGAGA TATGCGTCAG TTAAAAGGGC CAATTGATGA ACTTCTGAAT
CCGAAGAACT ACCACAATGG GAATACAAAG GACTATATTC ATGCGACATT AACTGATGAA
GAGGAAATCT ATGATGCAAT TGGACGGATT CGTAGTATTT ATCCAAATGT AATGCGGATT
GAATTTGATA ACAGTAAGAC AAAGCCAAAT GAGACAGCAA AACTGGTAGC TGAGGATGTT
ATTAGAAAAG ACCCTCTTTG TTTATTTGAA GAGTTTTTCA AGAATCAGAA TAATGTTTCT
ATGTCCGACG AGCAGAATGA AATCATGAAA AAACTACTGT TTGAGTAA
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| Protein sequence | MKFMHLSDLH IGKRVNEFSM IEDQTYILQK ILELADEEKP DAVLIAGDVY DKNLPTIEGV
NLLDDFLSDL HKRKIPVFMI SGNHDSAERL NFASRILRNN EVYIAGTYQG EIARYTLNDG
HGPVNIYLLP FVKPAIASVY HEGIESYHDA VKAILAAAKV NKAERNILVA HQFVTAGDIS
PECCDSENIS VGGLDNVDVS VFDDFEYVAL GHLHGPQRIG RDTVRYAGSP LKYSFSEAKQ
KKSVTMVTID TKGEIKQEYI PLIPLRDMRQ LKGPIDELLN PKNYHNGNTK DYIHATLTDE
EEIYDAIGRI RSIYPNVMRI EFDNSKTKPN ETAKLVAEDV IRKDPLCLFE EFFKNQNNVS
MSDEQNEIMK KLLFE
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